Amplicon sequence variants (ASVs) recovered from samples and their related identification as Pseudo-nitzschia taxa and the methods used
Amplicon sequence variants (ASVs) recovered from samples and their related identification as Pseudo-nitzschia taxa and the methods used
Date
2021-04-29
Authors
Jenkins, Bethany D.
Bertin, Matthew
Bertin, Matthew
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Date Created
2021-04-05
Location
Narragansett Bay, Rhode Island
westlimit: -71.42; southlimit: 40.206; eastlimit: -70.8626; northlimit: 41.6716
westlimit: -71.42; southlimit: 40.206; eastlimit: -70.8626; northlimit: 41.6716
DOI
10.26008/1912/bco-dmo.847469.1
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Abstract
This dataset is related to approximately weekly sampling of Narragansett Bay, RI in tandem with the University of Rhode Island (URI) Graduate School of Oceanography (GSO) Long-Term Plankton Time Series (LTPTS) and Fish Trawl Survey to examine species assemblages and toxicity of the diatom genus Pseudo-nitzschia spp. This dataset includes the amplicon sequence variants (ASVs) recovered from samples and their related identification as Pseudo-nitzschia taxa and the methods used related to the Sterling et al manuscript. These data are connected to NCBI Bioproject PRJNA690940 & GenBank Accession Numbers MW447658 – MW447770, which will be released January 2025 or when the associated manuscript is published, whichever occurs first.
For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/847469
Description
Dataset: Pseudo-nitzschia amplicon sequence variants (ASVs)
Embargo Date
Citation
Jenkins, B. D., & Bertin, M. (2021). Amplicon sequence variants (ASVs) recovered from samples and their related identification as Pseudo-nitzschia taxa and the methods used (Version 1) [Data set]. Biological and Chemical Oceanography Data Management Office (BCO-DMO). https://doi.org/10.26008/1912/BCO-DMO.847469.1