RNA-Seq sample information and accessions numbers for the copepods Neocalanus flemingeri (Prince William Sound, Gulf of Alaska)(2015-2017) and Labidocera madurae (Kane‘ohe Bay, Oahu, Hawaii)(2017)
RNA-Seq sample information and accessions numbers for the copepods Neocalanus flemingeri (Prince William Sound, Gulf of Alaska)(2015-2017) and Labidocera madurae (Kane‘ohe Bay, Oahu, Hawaii)(2017)
Date
2020-09-17
Authors
Hartline, Daniel K
Lenz, Petra
Hopcroft, Russell R.
Roncalli, Vittoria
Cieslak, Matthew C.
Lenz, Petra
Hopcroft, Russell R.
Roncalli, Vittoria
Cieslak, Matthew C.
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Date Created
2020-09-11
Location
Gulf of Alaska; Seward Line
westlimit: -157.1167; southlimit: 21.2833; eastlimit: -147.8033; northlimit: 60.535
westlimit: -157.1167; southlimit: 21.2833; eastlimit: -147.8033; northlimit: 60.535
DOI
10.26008/1912/bco-dmo.821289.1
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Abstract
This dataset includes accession information for RNA-seq data for the copepods Neocalanus flemingeri and Labidocera madurae used to generate de novo reference transcriptomes and for gene expression analysis. N. flemingeri adult females (CVI) were collected in Prince Williams Sound (Gulf of Alaska) during the fall (September 2015 and 2017) oceanographic cruises of the Seward line long-term observation program (ltop)(http://www.sfos.uaf.edu/sewardline/) and Northern Gulf of Alaska Long-Term Ecological Research Program (NGA LTER). For each sample collection date and preservation dates are listed. Labidocera madurae adult females (CVI) and mixed copepodid stages (CIII-CV) were collected in Kane‘ohe Bay, Oahu (Hawaii) in August 2015.
For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/821289
Description
Dataset: Copepod RNA-Seq sample information and accessions
Embargo Date
Citation
Hartline, D., Lenz, P., Hopcroft, R., Roncalli, V., & Cieslak, M. (2020). RNA-Seq sample information and accessions numbers for the copepods Neocalanus flemingeri (Prince William Sound, Gulf of Alaska)(2015-2017) and Labidocera madurae (Kane‘ohe Bay, Oahu, Hawaii)(2017) (Version 1) [Data set]. Biological and Chemical Oceanography Data Management Office (BCO-DMO). https://doi.org/10.26008/1912/BCO-DMO.821289.1