Expanding Tara oceans protocols for underway, ecosystemic sampling of the ocean-atmosphere interface during Tara Pacific expedition (2016-2018)

dc.contributor.author Gorsky, Gabriel
dc.contributor.author Bourdin, Guillaume
dc.contributor.author Lombard, Fabien
dc.contributor.author Pedrotti, Maria Luiza
dc.contributor.author Audrain, Samuel
dc.contributor.author Bin, Nicolas
dc.contributor.author Boss, Emmanuel S.
dc.contributor.author Bowler, Chris
dc.contributor.author Cassar, Nicolas
dc.contributor.author Caudan, Loic
dc.contributor.author Chabot, Genevieve
dc.contributor.author Cohen, Natalie R.
dc.contributor.author Cron, Daniel
dc.contributor.author De Vargas, Colomban
dc.contributor.author Dolan, John R.
dc.contributor.author Douville, Eric
dc.contributor.author Elineau, Amanda
dc.contributor.author Flores, J. Michel
dc.contributor.author Ghiglione, Jean-Francois
dc.contributor.author Haëntjens, Nils
dc.contributor.author Hertau, Martin
dc.contributor.author John, Seth G.
dc.contributor.author Kelly, Rachel L.
dc.contributor.author Koren, Ilan
dc.contributor.author Lin, Yajuan
dc.contributor.author Marie, Dominique
dc.contributor.author Moulin, Clémentine
dc.contributor.author Moucherie, Yohann
dc.contributor.author Pesant, Stephane
dc.contributor.author Picheral, Marc
dc.contributor.author Poulain, Julie
dc.contributor.author Pujo-Pay, Mireille
dc.contributor.author Reverdin, Gilles
dc.contributor.author Romac, Sarah
dc.contributor.author Sullivan, Mathew B.
dc.contributor.author Trainic, Miri
dc.contributor.author Tressol, Marc
dc.contributor.author Troublé, Romain
dc.contributor.author Vardi, Assaf
dc.contributor.author Voolstra, Christian R.
dc.contributor.author Wincker, Patrick
dc.contributor.author Agostini, Sylvain
dc.contributor.author Banaigs, Bernard
dc.contributor.author Boissin, Emilie
dc.contributor.author Forcioli, Didier
dc.contributor.author Furla, Paola
dc.contributor.author Galand, Pierre E.
dc.contributor.author Gilson, Eric
dc.contributor.author Reynaud, Stephanie
dc.contributor.author Sunagawa, Shinichi
dc.contributor.author Thomas, Olivier P.
dc.contributor.author Vega Thurber, Rebecca
dc.contributor.author Zoccola, Didier
dc.contributor.author Planes, Serge
dc.contributor.author Allemand, Denis
dc.contributor.author Karsenti, Eric
dc.date.accessioned 2020-03-02T21:01:41Z
dc.date.available 2020-03-02T21:01:41Z
dc.date.issued 2019-12-11
dc.description © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Gorsky, G., Bourdin, G., Lombard, F., Pedrotti, M. L., Audrain, S., Bin, N., Boss, E., Bowler, C., Cassar, N., Caudan, L., Chabot, G., Cohen, N. R., Cron, D., De Vargas, C., Dolan, J. R., Douville, E., Elineau, A., Flores, J. M., Ghiglione, J. F., Haentjens, N., Hertau, M., John, S. G., Kelly, R. L., Koren, I., Lin, Y., Marie, D., Moulin, C., Moucherie, Y., Pesant, S., Picheral, M., Poulain, J., Pujo-Pay, M., Reverdin, G., Romac, S., Sullivan, M. B., Trainic, M., Tressol, M., Trouble, R., Vardi, A., Voolstra, C. R., Wincker, P., Agostini, S., Banaigs, B., Boissin, E., Forcioli, D., Furla, P., Galand, P. E., Gilson, E., Reynaud, S., Sunagawa, S., Thomas, O. P., Thurber, R. L. V., Zoccola, D., Planes, S., Allemand, D., Karsenti, E. Expanding Tara oceans protocols for underway, ecosystemic sampling of the ocean-atmosphere interface during Tara Pacific expedition (2016-2018). Frontiers in Marine Science, 6, (2019): 750, doi: 10.3389/fmars.2019.00750. en_US
dc.description.abstract Interactions between the ocean and the atmosphere occur at the air-sea interface through the transfer of momentum, heat, gases and particulate matter, and through the impact of the upper-ocean biology on the composition and radiative properties of this boundary layer. The Tara Pacific expedition, launched in May 2016 aboard the schooner Tara, was a 29-month exploration with the dual goals to study the ecology of reef ecosystems along ecological gradients in the Pacific Ocean and to assess inter-island and open ocean surface plankton and neuston community structures. In addition, key atmospheric properties were measured to study links between the two boundary layer properties. A major challenge for the open ocean sampling was the lack of ship-time available for work at “stations”. The time constraint led us to develop new underway sampling approaches to optimize physical, chemical, optical, and genomic methods to capture the entire community structure of the surface layers, from viruses to metazoans in their oceanographic and atmospheric physicochemical context. An international scientific consortium was put together to analyze the samples, generate data, and develop datasets in coherence with the existing Tara Oceans database. Beyond adapting the extensive Tara Oceans sampling protocols for high-resolution underway sampling, the key novelties compared to Tara Oceans’ global assessment of plankton include the measurement of (i) surface plankton and neuston biogeography and functional diversity; (ii) bioactive trace metals distribution at the ocean surface and metal-dependent ecosystem structures; (iii) marine aerosols, including biological entities; (iv) geography, nature and colonization of microplastic; and (v) high-resolution underway assessment of net community production via equilibrator inlet mass spectrometry. We are committed to share the data collected during this expedition, making it an important resource important resource to address a variety of scientific questions. en_US
dc.description.sponsorship We are thankful for the commitment of the people and the following institutions, for their financial and scientific support that made this singular expedition possible: CNRS, PSL, CSM, EPHE, Genoscope/CEA, Inserm, Université Cote d’Azur, ANR, the Tara Ocean Foundation and its partners agnès b., UNESCO-IOC, the Veolia Environment Foundation, Région Bretagne, Serge Ferrari, Billerudkorsnas, Amerisource Bergen Company, Altran, Lorient Agglomeration, Oceans by Disney, the Prince Albert II de Monaco Foundation, L’Oréal, Biotherm, France Collectivités, Kankyo Station, Fonds Français pour l’Environnement Mondial (FFEM), Etienne Bourgois, the Tara Ocean Foundation teams and crew. Tara Pacific would not exist without the continuous support of the participating institutes. This study has been conducted using E.U. Copernicus Marine Service Information and Mercator Ocean products. We acknowledge funding from the Investissement d’avenir project France Génomique (ANR-10-INBS-09). FL is supported by Sorbonne Université, Institut Universitaire de France and the Fondation CA-PCA. The in-line and atmospheric optics dataset was collected and analyzed with support from NASA Ocean Biology and Biogeochemistry program under grants NNX13AE58G and NNX15AC08G to University of Maine. MF, IK, and AV are supported by a research grant from Scott Jordan and Gina Valdez, the De Botton for Marine Science, the Yeda-Sela center for Basic research, and the Sustainability and Energy Research Initiative (SAERI). NCo was supported by a grant from the Simons Foundation/SFARI (544236). NCa and YL were supported by the “Laboratoire d’Excellence” LabexMER (ANR-10-LABX-19) and co-funded by a grant from the French government under the program “Investissements d’Avenir.” The support of Pr. Alan Fuchs, President of CNRS, was crucial for the success of the surface sampling undertaken during the Tara Pacific expedition. We thank A. Gavilli from TECA Inc. France, and E. Tanguy and D. Delhommeau from the Institut de la Mer, Villefranche-sur-Mer for the helpful collaboration in the conception of the High Speed Net and the Dolphin systems. This publication is number 2 of the Tara Pacific Consortium. en_US
dc.identifier.citation Gorsky, G., Bourdin, G., Lombard, F., Pedrotti, M. L., Audrain, S., Bin, N., Boss, E., Bowler, C., Cassar, N., Caudan, L., Chabot, G., Cohen, N. R., Cron, D., De Vargas, C., Dolan, J. R., Douville, E., Elineau, A., Flores, J. M., Ghiglione, J. F., Haentjens, N., Hertau, M., John, S. G., Kelly, R. L., Koren, I., Lin, Y., Marie, D., Moulin, C., Moucherie, Y., Pesant, S., Picheral, M., Poulain, J., Pujo-Pay, M., Reverdin, G., Romac, S., Sullivan, M. B., Trainic, M., Tressol, M., Trouble, R., Vardi, A., Voolstra, C. R., Wincker, P., Agostini, S., Banaigs, B., Boissin, E., Forcioli, D., Furla, P., Galand, P. E., Gilson, E., Reynaud, S., Sunagawa, S., Thomas, O. P., Thurber, R. L. V., Zoccola, D., Planes, S., Allemand, D., Karsenti, E. (2019). Expanding Tara oceans protocols for underway, ecosystemic sampling of the ocean-atmosphere interface during Tara Pacific expedition (2016-2018). Frontiers in Marine Science, 6, 750. en_US
dc.identifier.doi 10.3389/fmars.2019.00750
dc.identifier.uri https://hdl.handle.net/1912/25458
dc.publisher Frontiers Media en_US
dc.relation.uri https://doi.org/10.3389/fmars.2019.00750
dc.rights Attribution 4.0 International *
dc.rights.uri http://creativecommons.org/licenses/by/4.0/ *
dc.subject Neuston/plankton genomics/taxonomy/imaging en_US
dc.subject Aerosols en_US
dc.subject NCP en_US
dc.subject IOP en_US
dc.subject Trace metals en_US
dc.subject Microplastic en_US
dc.title Expanding Tara oceans protocols for underway, ecosystemic sampling of the ocean-atmosphere interface during Tara Pacific expedition (2016-2018) en_US
dc.type Article en_US
dspace.entity.type Publication
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