Whoriskey
Frederick G.
Whoriskey
Frederick G.
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Technical ReportEffects of commercial fishing on adult Atlantic salmon (Salmo salar) in a Quebec river(Woods Hole Oceanographic Institution, 1982-01) Whoriskey, Frederick G. ; Naiman, Robert J.Despite an absence of freshwater exploitation, the adult salmon run in the Matamek River, Quebec, declined during 1975-1980 to <23% of the level thought to occur there prior to 1967. Returns in 1979 and 1980 of adults tagged as smolts were 1.0% and 0.9%, respectively. Numbers of emigrating smolts and their corresponding adult returns are not significantly correlated, although we observed a trend towards more salmon (2 sea year fish) returning with larger numbers of migrating smolts. Since 1967 there is noted a decrease in the age at which returning adults smolted and females appear to now constitute a larger percentage of returning grilse and salmon. These, and other changes in life history characteristics, appear to be caused solely by commercial exploitation.
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ArticleA standardisation framework for bio-logging data to advance ecological research and conservation(Wiley, 2021-03-15) Sequeira, Ana M. M. ; O'Toole, Malcolm ; Keates, Theresa R. ; McDonnell, Laura H. ; Braun, Camrin D. ; Hoenner, Xavier ; Jaine, Fabrice R. A. ; Jonsen, Ian ; Newman, Peggy ; Pye, Jonathan ; Bograd, Steven ; Hays, Graeme ; Hazen, Elliott L. ; Holland, Melinda ; Tsontos, Vardis ; Blight, Clint ; Cagnacci, Francesca ; Davidson, Sarah C. ; Dettki, Holger ; Duarte, Carlos M. ; Dunn, Daniel C. ; Eguíluz, Víctor M. ; Fedak, Michael ; Gleiss, Adrian C. ; Hammerschlag, Neil ; Hindell, Mark ; Holland, Kim ; Janekovic, Ivica ; McKinzie, Megan K. ; Muelbert, Monica M. C. ; Pattiaratchi, Charitha ; Rutz, Christian ; Sims, David W. ; Simmons, Samantha E. ; Townsend, Brendal ; Whoriskey, Frederick G. ; Woodward, Bill ; Costa, Daniel P. ; Heupel, Michelle R. ; McMahon, Clive R. ; Harcourt, Robert ; Weise, Michael1. Bio-logging data obtained by tagging animals are key to addressing global conservation challenges. However, the many thousands of existing bio-logging datasets are not easily discoverable, universally comparable, nor readily accessible through existing repositories and across platforms, slowing down ecological research and effective management. A set of universal standards is needed to ensure discoverability, interoperability and effective translation of bio-logging data into research and management recommendations. 2. We propose a standardisation framework adhering to existing data principles (FAIR: Findable, Accessible, Interoperable and Reusable; and TRUST: Transparency, Responsibility, User focus, Sustainability and Technology) and involving the use of simple templates to create a data flow from manufacturers and researchers to compliant repositories, where automated procedures should be in place to prepare data availability into four standardised levels: (a) decoded raw data, (b) curated data, (c) interpolated data and (d) gridded data. Our framework allows for integration of simple tabular arrays (e.g. csv files) and creation of sharable and interoperable network Common Data Form (netCDF) files containing all the needed information for accuracy-of-use, rightful attribution (ensuring data providers keep ownership through the entire process) and data preservation security. 3. We show the standardisation benefits for all stakeholders involved, and illustrate the application of our framework by focusing on marine animals and by providing examples of the workflow across all data levels, including filled templates and code to process data between levels, as well as templates to prepare netCDF files ready for sharing. 4. Adoption of our framework will facilitate collection of Essential Ocean Variables (EOVs) in support of the Global Ocean Observing System (GOOS) and inter-governmental assessments (e.g. the World Ocean Assessment), and will provide a starting point for broader efforts to establish interoperable bio-logging data formats across all fields in animal ecology.
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Technical ReportMatamek annual report for 1978(Woods Hole Oceanographic Institution, 1979-05) Whoriskey, Frederick G.This is a report describing activities associated with the Matamek program in 1978. Research was conducted on biological, chemical and physical factors related to salmonid production in Matamek River and Matamek Lake. Canadian universities, the Quebec government and Woods Hole Oceanographic Institution cooperated in this program .
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ArticleEvolving and sustaining ocean best practices and standards for the next decade(Frontiers Media, 2019-06-04) Pearlman, Jay ; Bushnell, Mark ; Coppola, Laurent ; Karstensen, Johannes ; Buttigieg, Pier Luigi ; Pearlman, Francoise ; Simpson, Pauline ; Barbier, Michele ; Muller-Karger, Frank E. ; Munoz-Mas, Cristian ; Pissierssens, Peter ; Chandler, Cynthia L. ; Hermes, Juliet ; Heslop, Emma ; Jenkyns, Reyna ; Achterberg, Eric P. ; Bensi, Manuel ; Bittig, Henry C. ; Blandin, Jerome ; Bosch, Julie ; Bourles, Bernard ; Bozzano, Roberto ; Buck, Justin J. H. ; Burger, Eugene ; Cano, Daniel ; Cardin, Vanessa ; Llorens, Miguel Charcos ; Cianca, Andrés ; Chen, Hua ; Cusack, Caroline ; Delory, Eric ; Garello, Rene ; Giovanetti, Gabriele ; Harscoat, Valerie ; Hartman, Susan ; Heitsenrether, Robert ; Jirka, Simon ; Lara-Lopez, Ana ; Lantér, Nadine ; Leadbetter, Adam ; Manzella, Giuseppe ; Maso, Joan ; McCurdy, Andrea ; Moussat, Eric ; Ntoumas, Manolis ; Pensieri, Sara ; Petihakis, George ; Pinardi, Nadia ; Pouliquen, Sylvie ; Przeslawski, Rachel ; Roden, Nicholas P. ; Silke, Joe ; Tamburri, Mario N. ; Tang, Hairong ; Tanhua, Toste ; Telszewski, Maciej ; Testor, Pierre ; Thomas, Julie ; Waldmann, Christoph ; Whoriskey, Frederick G.The oceans play a key role in global issues such as climate change, food security, and human health. Given their vast dimensions and internal complexity, efficient monitoring and predicting of the planet’s ocean must be a collaborative effort of both regional and global scale. A first and foremost requirement for such collaborative ocean observing is the need to follow well-defined and reproducible methods across activities: from strategies for structuring observing systems, sensor deployment and usage, and the generation of data and information products, to ethical and governance aspects when executing ocean observing. To meet the urgent, planet-wide challenges we face, methods across all aspects of ocean observing should be broadly adopted by the ocean community and, where appropriate, should evolve into “Ocean Best Practices.” While many groups have created best practices, they are scattered across the Web or buried in local repositories and many have yet to be digitized. To reduce this fragmentation, we introduce a new open access, permanent, digital repository of best practices documentation (oceanbestpractices.org) that is part of the Ocean Best Practices System (OBPS). The new OBPS provides an opportunity space for the centralized and coordinated improvement of ocean observing methods. The OBPS repository employs user-friendly software to significantly improve discovery and access to methods. The software includes advanced semantic technologies for search capabilities to enhance repository operations. In addition to the repository, the OBPS also includes a peer reviewed journal research topic, a forum for community discussion and a training activity for use of best practices. Together, these components serve to realize a core objective of the OBPS, which is to enable the ocean community to create superior methods for every activity in ocean observing from research to operations to applications that are agreed upon and broadly adopted across communities. Using selected ocean observing examples, we show how the OBPS supports this objective. This paper lays out a future vision of ocean best practices and how OBPS will contribute to improving ocean observing in the decade to come.