Applied Ocean Physics and Engineering (AOP&E)
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The Department is a major center for research in fluid mechanics, coastal processes, ocean mixing, acoustics, air-sea interaction, deep submergence, ocean systems and moorings, remote sensing, robotics, certain biological processes, image processing, signal processing and estimation, control theory, and the dynamics of ocean cables.
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ArticleBroadening inclusivity at sea(Frontiers Media, 2024-06-13)Ocean sciences in the U.S. remains a field with one of the lowest rates of diversity, having disproportionately low representation from marginalized groups, including Black, Asian, LatinX, Indigenous, and other people of color; LGBTQIA+ individuals; disabled persons; women; those with neurological differences; and those from low-income groups. With equity and inclusion in mind, recent efforts have been made to increase the number of ocean science professionals from marginalized groups through multiple entry points, including internships. However, there still exists a large gap between the diversity found in the general population and the diversity within ocean sciences. Perhaps one reason why this field continues to have lower diversity owes to the unique component of many oceanographic careers, which continues to present an especially high barrier for marginalized groups: participating in sea-going research expeditions. Herein, we have synthesized possible ways to prioritize the physical and emotional safety of marginalized ocean science professionals participating in a research expedition, including guidance on preparation, implementation, and providing support post-cruise. These suggestions are intended to be useful for the broader oceanographic research community to consider the safety and well-being of individuals from marginalized groups at sea, since the field of ocean sciences - like all fields - would greatly benefit from increased representation and diversity.
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ArticleImpacts of hydrostatic pressure on distributed temperature-sensing optical fibers for extreme ocean and ice environments(MDPI, 2024-07-02)Optical fiber is increasingly used for both communication and distributed sensing of temperature and strain in environmental studies. In this work, we demonstrate the viability of unreinforced fiber tethers (bare fiber) for Raman-based distributed temperature sensing in deep ocean and deep ice environments. High-pressure testing of single-mode and multimode optical fiber showed little to no changes in light attenuation over pressures from atmospheric to 600 bars. Most importantly, the differential attenuation between Stokes and anti-Stokes frequencies, critical for the evaluation of distributed temperature sensing, was shown to be insignificantly affected by fluid pressures over the range of pressures tested for single-mode fiber, and only very slightly affected in multimode fiber. For multimode fiber deployments to ocean depths as great as 6000 m, the effect of pressure-dependent differential attenuation was shown to impact the estimated temperatures by only 0.15 °K. These new results indicate that bare fiber tethers, in addition to use for communication, can be used for distributed temperature or strain in fibers subjected to large depth (pressure) in varying environments such as deep oceans, glaciers and potentially the icy moons of Saturn and Jupiter.
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ArticleHarnessing (geoacoustic) uncertainty(Acoustical Society of America, 2024-07-01)In 1979, in his The Hitchhiker's Guide to the Galaxy,1 Douglas Adams wrote, “we demand rigidly defined areas of doubt and uncertainty!” In a 2002 article in the Journal of the Acoustical Society of America, Stan Dosso delivered an impactful solution2 for geoacoustic inversion.
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ArticleOptimizing seaweed biomass production—A two kelp solution(Springer, 2024-07-02)Interest in farming kelps has grown beyond using kelp for food, feed or biofuels. There is considerable interest in generating biomass from seaweed for use in bioplastics and other products that would substitute for petroleum-derived products. For these uses to be viable, large amounts of biomass are needed. Very large kelp farms can be expensive to build and maintain, leading to the need to optimize the biomass per unit area. Although close spacing of growlines can lead to poor growth, a viable approach may be to grow two species of kelps together: one that hangs down and one that is buoyant, growing up. This system would increase the spacing in three dimensions. In Alaska, Saccharina latissima is commonly grown hanging down from longlines. One of the buoyant Alaskan kelps is Nereocystis luetkeana. Because there are commercial uses for wild-harvested Nereocystis in Alaska, we undertook a preliminary trial in Kodiak, Alaska, that grew both Saccharina and Nereocystis in the same longline array. Closely spaced lines were seeded the first week of February 2023 and set at 3 m below the surface. The arrays were harvested in late June 2023. Total yields were greatest on the combined arrays, followed by the Nereocystis only and Saccharina only arrays. Despite having 45% fewer grow-lines, the total yield of the Nereocystis on the combined arrays was statistically similar to the Nereocystis only arrays. These results may have significance for large scale macroalgal production.
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ArticleOn the role of small estuaries in retaining buoyant particles(National Academy of Sciences, 2024-08-19)Estuaries, as connectors between land and ocean, have complex interactions of river and tidal flows that affect the transport of buoyant materials like floating plastics, oil spills, organic matter, and larvae. This study investigates surface-trapped buoyant particle transport in estuaries by using idealized and realistic numerical simulations along with a theoretical model. While river discharge and estuarine exchange flow are usually expected to export buoyant particles to the ocean over subtidal timescales, this study reveals a ubiquitous physical transport mechanism that causes retention of buoyant particles in estuaries. Tidally varying surface convergence fronts affect the aggregation of buoyant particles, and the coupling between particle aggregation and oscillatory tidal currents leads to landward transport at subtidal timescales. Landward transport and retention of buoyant particles is greater in small estuaries, while large estuaries tend to export buoyant particles to the ocean. A dimensionless width parameter incorporating the tidal radian frequency and lateral velocity distinguishes small and large estuaries at a transitional value of around 1. Additionally, higher river flow tends to shift estuaries toward seaward transport and export of buoyant particles. These findings provide insights into understanding the distribution of buoyant materials in estuaries and predicting their fate in the land–sea exchange processes.
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ArticleFrom shelfbreak to shoreline: coastal sea level and local ocean dynamics in the Northwest Atlantic(American Geophysical Union, 2024-07-19)Sea-level change threatens the U.S. East Coast. Thus, it is important to understand the underlying causes, including ocean dynamics. Most past studies emphasized links between coastal sea level and local atmospheric variability or large-scale circulation and climate, but possible relationships with local ocean currents over the shelf and slope remain largely unexplored. Here we use 7 years of in situ velocity and sea-level data to quantify the relationship between northeastern U.S. coastal sea level and variable Shelfbreak Jet transport south of Nantucket Island. At timescales of 1–15 days, southern New England coastal sea level and transport vary in anti-phase, with magnitude-squared coherences of ∼0.5 and admittance amplitudes of ∼0.3 m Sv−1. These results are consistent with a dominant geostrophic balance between along-shelf transport and coastal sea level, corroborating a hypothesis made decades ago that was not tested due to the lack of transport data.
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ArticleRemote sensing of emperor penguin abundance and breeding success(Nature Research, 2024-05-29)Emperor penguins (Aptenodytes forsteri) are under increasing environmental pressure. Monitoring colony size and population trends of this Antarctic seabird relies primarily on satellite imagery recorded near the end of the breeding season, when light conditions levels are sufficient to capture images, but colony occupancy is highly variable. To correct population estimates for this variability, we develop a phenological model that can predict the number of breeding pairs and fledging chicks, as well as key phenological events such as arrival, hatching and foraging times, from as few as six data points from a single season. The ability to extrapolate occupancy from sparse data makes the model particularly useful for monitoring remotely sensed animal colonies where ground-based population estimates are rare or unavailable.
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ArticleDevelopment of a quantum cascade laser absorption spectrometer for simultaneous measurement of 13C-18O and 18O-18O clumping in CO2(Wiley, 2024-06-18)Dual clumped isotope paleothermometry determines carbonate formation temperatures by measuring the frequency of 13C–18O (∆638) and 18O–18O (∆828) pairs in carbonates. It resolves isotopic kinetic biases and thus enables more accurate paleotemperature reconstructions. However, high-precision measurements of 18O–18O clumping using current techniques requires large sample sizes and long acquisition times. We developed a mid-infrared isotope ratio laser spectrometer (IRLS) for simultaneous measurement of the isotopologue ratios ∆638 and ∆828 in gas-phase carbon dioxide (CO2) at room temperature. Our IRLS uses a single laser scanning from 2290.7 to 2291.1 cm−1 and a 31 m pathlength optical cell, and it simultaneously measures the five isotopologues required for calculating ∆638 and ∆828: 16O12C16O, 16O13C16O, 16O12C18O, 16O13C18O, and 18O12C18O. In addition, our IRLS can measure 16O12C17O, enabling ∆17O analysis. At ~20°C and a CO2 pressure of ~2 Torr, our IRLS system achieved precisions of 0.128‰ and 0.140‰ within 20 s for abundances of the clumped isotopologues 16O13C18O and 18O12C18O, respectively, and precisions of 0.267‰, 0.245‰, and 0.128‰ for 16O12C16O, 16O13C16O, and 16O12C18O. This yielded precisions of 0.348‰ (∆638) and 0.302‰ (∆828) within 25 s. Simulated sample–reference switching highlights the potential of our system and the need for further development. We demonstrated simultaneous measurements of ∆638 and ∆828 in CO2 to precisions of <0.35‰ within 25 s using a room-temperature, single-laser IRLS. Future developments on better resolving 16O12C16O and 16O13C16O peaks and system temperature control could further improve the measurement precision.
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ArticleA new framework for quantifying alongshore variability of swash motion using fully convolutional networks(Elsevier, 2024-05-24)Waves running up and down the beach (‘swash’) at the landward edge of the ocean can cause changes to the beach topology, can erode dunes, and can result in inland flooding. Despite the importance of swash, field observations are difficult to obtain in the thin, bubbly, and potentially sediment laden fluid layers. Here, swash excursions along an Atlantic Ocean beach are estimated with a new framework, V-BeachNet, that uses a fully convolutional network to distinguish between sand and the moving edge of the wave in rapid sequences of images. V-BeachNet is trained with 16 randomly selected and manually segmented images of the swash zone, and is used to estimate swash excursions along 200 m of the shoreline by automatically segmenting four 1-h sequences of images that span a range of incident wave conditions. Data from a scanning lidar system are used to validate the swash estimates along a cross-shore transect within the camera field of view. V-BeachNet estimates of swash spectra, significant wave heights, and wave-driven setup (increases in the mean water level) agree with those estimated from the lidar data.
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ArticleOcean surface radiation measurement best practices(Frontiers Media, 2024-05-23)Ocean surface radiation measurement best practices have been developed as a first step to support the interoperability of radiation measurements across multiple ocean platforms and between land and ocean networks. This document describes the consensus by a working group of radiation measurement experts from land, ocean, and aircraft communities. The scope was limited to broadband shortwave (solar) and longwave (terrestrial infrared) surface irradiance measurements for quantification of the surface radiation budget. Best practices for spectral measurements for biological purposes like photosynthetically active radiation and ocean color are only mentioned briefly to motivate future interactions between the physical surface flux and biological radiation measurement communities. Topics discussed in these best practices include instrument selection, handling of sensors and installation, data quality monitoring, data processing, and calibration. It is recognized that platform and resource limitations may prohibit incorporating all best practices into all measurements and that spatial coverage is also an important motivator for expanding current networks. Thus, one of the key recommendations is to perform interoperability experiments that can help quantify the uncertainty of different practices and lay the groundwork for a multi-tiered global network with a mix of high-accuracy reference stations and lower-cost platforms and practices that can fill in spatial gaps.
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ArticleThe MOSAiC Distributed Network: Observing the coupled Arctic system with multidisciplinary, coordinated platforms(University of California Press, 2024-05-10)Central Arctic properties and processes are important to the regional and global coupled climate system. The Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) Distributed Network (DN) of autonomous ice-tethered systems aimed to bridge gaps in our understanding of temporal and spatial scales, in particular with respect to the resolution of Earth system models. By characterizing variability around local measurements made at a Central Observatory, the DN covers both the coupled system interactions involving the ocean-ice-atmosphere interfaces as well as three-dimensional processes in the ocean, sea ice, and atmosphere. The more than 200 autonomous instruments (“buoys”) were of varying complexity and set up at different sites mostly within 50 km of the Central Observatory. During an exemplary midwinter month, the DN observations captured the spatial variability of atmospheric processes on sub-monthly time scales, but less so for monthly means. They show significant variability in snow depth and ice thickness, and provide a temporally and spatially resolved characterization of ice motion and deformation, showing coherency at the DN scale but less at smaller spatial scales. Ocean data show the background gradient across the DN as well as spatially dependent time variability due to local mixed layer sub-mesoscale and mesoscale processes, influenced by a variable ice cover. The second case (May–June 2020) illustrates the utility of the DN during the absence of manually obtained data by providing continuity of physical and biological observations during this key transitional period. We show examples of synergies between the extensive MOSAiC remote sensing observations and numerical modeling, such as estimating the skill of ice drift forecasts and evaluating coupled system modeling. The MOSAiC DN has been proven to enable analysis of local to mesoscale processes in the coupled atmosphere-ice-ocean system and has the potential to improve model parameterizations of important, unresolved processes in the future.
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ArticleDevelopment of single-pin, un-barbed, pole-tagging of free-swimming dolphins and sharks with satellite-linked transmitters(BioMed Central, 2024-04-15)To tag large marine vertebrates, without the need to catch them, avoiding using barbs for tag retention, and precisely controlling tag location, the remote Tag Attachment Device on a pole (TADpole) was developed. This allows single-pin tags (Finmount, Wildlife Computers) to be attached to the dorsal fins of free-swimming large marine vertebrates.
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ArticleShort wave attenuation by a kelp forest canopy(Association for the Sciences of Limnology and Oceanography (ASLO), 2024-05-10)Giant kelp (Macrocystis pyrifera) forests are common along the California coast. Attached on the rocky bottom at depths of approximately 5–25 m, the kelp, when mature, spans the water column and develops dense, buoyant canopies that interact with waves and currents. We present two novel results based on observations of surface gravity waves in a kelp forest in Point Loma, California. First, we report short wave (1–3 s) attenuation in kelp, quantified by an exponential decay coefficient α~O(10^-3 m^-1) —comparable to the dampening effect of sea ice. Second, we identify seasonal and tidal changes in attenuation, peaking mid-summer with maximum kelp cover, and during low tide when a greater proportion of the fronds are at the surface. Thus, the naturally occurring surface canopies of kelp forests can act as temporally varying, high-frequency filters of wave energy.
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ArticleThe Brazil Basin tracer release experiment: Observations(American Meteorological Society, 2024-05-17)Lightening of bottom water is required to close the abyssal overturning circulation, believed to play an important role in the climate system. A tracer release experiment and turbulence measurement programs have revealed how bottom water is lightened, and illuminated the associated circulation in the deep Brazil Basin, a representative region of the global ocean. Tracer was released on an isopycnal surface about 4000 m deep, over one of the fracture zones emanating from the Mid-Atlantic Ridge (MAR). Tracer that mixed toward the bottom moved toward the MAR across isopycnal surfaces that bend down to intersect the bottom at a rate implying a near-bottom buoyancy flux of 1.5 × 10−9 m2 s−3, somewhat larger than inferred from dissipation measurements. The diffusivity at the level of the tracer release is estimated at 4.4 ± 1 × 10−4 m2 s−1, again larger than inferred from dissipation rates. The main patch moved southwest at about 2 cm s−1 while sinking due to the divergence of buoyancy flux above the bottom layer. The isopycnal eddy diffusivity was about 100 m2 s−1. Westward flow away from the MAR is the return flow balancing the eastward near-bottom upslope flow. The southward component of the flow is roughly consistent with conservation of potential vorticity. The circulation as well as the pattern of diapycnal flux are qualitatively the same as in St. Laurent et al. (2001) but are more robust. The results indicate that diapycnal diffusivity is about twice that invoked by Morris et al. (2001) in calculating the basinwide buoyancy budget.
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ArticleImproving growth models of cultivated sugar kelp, Saccharina latissima, by accounting for intraspecific variation in thermal tolerance(World Aquaculture Society, 2024-06-06)Dynamic models of sugar kelp (Saccharina latissima) growth are used to estimate the production potential of seaweed aquaculture in many regions around the world. These models do not currently account for the existence of S. latissima ecotypes that are adapted to regional environmental conditions, particularly temperature. We tested the hypothesis that recalibrating the temperature parameters of a dynamic energy budget model using literature data for S. latissima from regions with a similar climate to the region of interest would result in more accurate predictions than using a general species-wide temperature response curve. Calibrating the model using data from warm regions significantly improved model accuracy for kelp cultivation at the southern end of the species range (Rhode Island, USA) in cases where the original parameters underestimated growth but resulted in drastic overestimates when heavy frond erosion occurred. In Trømso, Norway, a cold parameterization produced extremely accurate predictions: the model predicted a final frond length of 88.2 cm, compared with the observed length of 87.5 (±4.70) cm. Our results demonstrate that recalibrating temperature response curves allows one model to be applied to kelp aquaculture in different regions, an important step toward the prediction of S. latissima productivity over large areas.
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ArticleKinematics of an ebb plume front in a tidal crossflow(American Geophysical Union, 2024-06-10)X-band marine radar observations and a hindcast simulation from a 3D hydrostatic model are used to provide an overview of Connecticut River (USA) ebb plume front expansion into the strong tidal crossflow of eastern Long Island Sound. The model performance is evaluated against in situ and remote sensing observations and demonstrates dominant control of the front by semidiurnal tides. The recurring frontal evolution is classified into three dynamical stages of arrest, propagation, and advection. A conceptual model that follows this progressing balance between outflow buoyancy and crossflow momentum qualitatively reproduces frontal evolution in both the radar observations and the hindcast. The majority of the residual, intertidal variability of front timing and geometry is explained by co-varying tidal amplitude, freshwater discharge, and wind stress using a multi-linear regression analysis of the radar observation record. Intrinsic front speeds in the modeled frontal propagation are compared with the analytical model of Benjamin (1968, https://doi.org/10.1017/s0022112068000133), with better agreement achieved after accounting for ambient near-surface shear associated with wind forcing.
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ArticleModeling coupled dynamics of an empirical predator-prey system to predict top predator recovery(Elsevier, 2024-05-16)Limited data, time, and funding lead conservation managers to make difficult choices in managing species recovery. Coupled dynamical models are relied upon for decision support, but their application to empirical predator-prey systems has generally been restricted to small, tractable species. To broaden their use in conservation decision-making, we developed a model suitable for predicting the population dynamics of a larger apex carnivore and its prey. We selected southern sea otters (Enhydra lutris nereis) and their primary estuarine prey as our case study and parameterized the dynamical model with data on sea otter, clam, and crab abundances; predator-prey interactions; and sea otter bioenergetics collected from Elkhorn Slough, CA. Our model, having integrated all these salient factors, was able to successfully reproduce trends in taxa abundance as well as shifts in sea otter diet composition and energy intake rates. Rich data inputs allow the model to predict population dynamics over realistic temporal scales not only for the site of data collection, but also for similar estuaries uncolonized by sea otters. Based on model projections parameterized with prey survey data from two such estuaries, Tomales Bay and Drakes Estero, we predict the sites could support over 160 sea otters and may hold potential to further species recovery. In systems with good data availability, the model has high predictive power and can provide multi-taxa projections useful for making informed management decisions.
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ArticleCross-shelf exchange in prograde Antarctic troughs driven by offshore propagating dense water eddies(American Meteorological Society, 2024-07-31)This study examines the link between near-bottom outflows of dense water formed in Antarctic coastal polynyas and onshore intrusions of Circumpolar Deep Water (CDW) through prograde troughs cutting across the continental shelf. Numerical simulations show that the dense water outflow is primarily in the form of cyclonic eddies. The trough serves as a topographic guide that organizes the offshore-moving dense water eddies into a chain pattern. The offshore migration speed of the dense water eddies is similar to the velocity of the dense water offshore flow in the trough, which scaling analysis finds to be proportional to the reduced gravity of the dense water and the slope of the trough sidewalls and to be inversely proportional to the Coriolis parameter. Our model simulations indicate that, as these cyclonic dense water eddies move across the trough mouth into the deep ocean, they entrain CDW from offshore and carry CDW clockwise along their periphery into the trough. Subsequent cyclonic dense water eddies then entrain the intruding CDW further toward the coast along the trough. This process of recurring onshore entrainment of CDW by a topographically constrained chain of offshore-flowing dense water eddies is consistent with topographic hotspots of onshore intrusion of CDW around Antarctica identified by other studies. It can bring CDW from offshore to close to the coast and thus impact the heat flux into Antarctic coastal regions, affecting interactions among ocean, sea ice, and ice shelves.
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ArticleOn the equivalence of scalar-pressure and vector-based acoustic dosage measures as derived from time-limited signal waveforms(Acoustical Society of America, 2024-05-15)The dynamic (acoustic pressure) and kinematic (acoustic acceleration and velocity) properties of time-limited signals are studied in terms of acoustic dose metrics as might be used to assess the impact of underwater noise on marine life. The work is relevant for the study of anthropogenic transient acoustic signals, such as airguns, pile driving, and underwater explosive sources, as well as more generic transient signals from sonar systems. Dose metrics are first derived from numerical simulations of sound propagation from a seismic airgun source as specified in a Joint Industry Programme benchmark problem. Similar analyses are carried out based on at-sea acoustic measurements on the continental shelf, made with a vector sensor positioned 1.45 m off the seabed. These measurements are on transient time-limited signals from multiple underwater explosive sources at differing ranges, and from a towed, sonar source. The study demonstrates, both numerically and experimentally, that under many realistic scenarios, kinematic based acoustic dosage metrics within the water column can be evaluated using acoustic pressure measurements.
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ArticleWave and roller transformation over barred bathymetry(American Geophysical Union, 2024-05-04)The cross-shore transformation of breaking-wave roller momentum and energy on observed barred surfzone bathymetry is investigated with a two-phase Reynolds Averaged Navier Stokes model driven with measured incident waves. Modeled wave spectra, wave heights, and wave-driven increases in the mean water level (setup) agree well with field observations along transects extending from 5-m water depth to the shoreline. Consistent with prior results the roller forcing contributes 50%–60% to the setup, whereas the advective terms contribute ∼20%, with the contribution of bottom stress largest (up to 20%) for shallow sandbar crest depths. The model simulations suggest that an energy-flux balance between wave dissipation, roller energy, and roller dissipation is accurate. However, as little as 70% of the modeled wave energy ultimately dissipated by breaking was first transferred from the wave to the roller. Furthermore, of the energy transferred to the roller, 15%–25% is dissipated by turbulence in the water column below the roller, with the majority of energy dissipated in the aerated region or near the roller-surface interface. The contributions of turbulence to the momentum balance are sensitive to the parameterized turbulent anisotropy, which observations suggest increases with increasing turbulence intensity. Here, modeled turbulent kinetic energy dissipation decreases with increasing depth of the sandbar crest, possibly reflecting a change from plunging (on the steeper offshore slope of the bar) to spilling breakers (over the flatter bar crest and trough). Thus, using a variable roller front slope in the roller-wave energy flux balance may account for these variations in breaker type.