NCBI accession numbers for RNAseq data from five coral species experimentally exposed to Stony Coral Tissue Loss Disease (SCTLD) at the University of the Virgin Islands in 2019
NCBI accession numbers for RNAseq data from five coral species experimentally exposed to Stony Coral Tissue Loss Disease (SCTLD) at the University of the Virgin Islands in 2019
dc.contributor.author | Mydlarz, Laura | |
dc.coverage.spatial | St. Thomas, U.S. Virgin Islands | |
dc.coverage.spatial | westlimit: -64.926; southlimit: 18.3277; eastlimit: -64.926; northlimit: 18.3277 | |
dc.coverage.temporal | 20190317 - 20190412 (UTC) | |
dc.date.accessioned | 2022-10-05T14:15:09Z | |
dc.date.available | 2022-10-05T14:15:09Z | |
dc.date.created | 2022-09-30 | |
dc.date.issued | 2022-10-05 | |
dc.description | Dataset: NCBI accession numbers for RNAseq data from five coral species experimentally exposed to SCTLD | |
dc.description.abstract | Raw RNA sequence data were obtained from a disease transmission experiment carried out at the University of the Virgin Islands in which five reef-building coral species, Colpophyllia natans, Orbicella annularis, Pseudodiploria strigosa, Porites astreoides, and Montastraea cavernosa, were exposed to Stony Coral Tissue Loss Disease (SCTLD) in mesocosms. Sequences were used to compare the differential expression of host and endosymbiont genes between disease states (control, disease-exposed, and disease-infected) and to elucidate a transcriptomic model of the holobiont response to SCTLD. This dataset includes National Center for Biotechnology Information (NCBI) accession numbers and related data for those five coral species examined in the experiment. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/881776 | |
dc.description.sponsorship | NSF Division of Ocean Sciences (NSF OCE) OCE-1928771 | |
dc.identifier.citation | Mydlarz, L. (2022). NCBI accession numbers for RNAseq data from five coral species experimentally exposed to Stony Coral Tissue Loss Disease (SCTLD) at the University of the Virgin Islands in 2019 (Version 1) [Data set]. Biological and Chemical Oceanography Data Management Office (BCO-DMO). https://doi.org/10.26008/1912/BCO-DMO.881776.1 | |
dc.identifier.doi | 10.26008/1912/bco-dmo.881776.1 | |
dc.identifier.uri | https://hdl.handle.net/1912/29387 | |
dc.language.iso | en_US | |
dc.publisher | Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu | |
dc.relation.uri | http://lod.bco-dmo.org/id/dataset/881776 | |
dc.relation.uri | https://doi.org/10.26008/1912/bco-dmo.881776.1 | |
dc.rights | Creative Commons Attribution 4.0 | |
dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ | |
dc.subject | RNAseq | |
dc.subject | SCTLD | |
dc.subject | Immunity | |
dc.subject | Disease | |
dc.subject | Stony coral tissue loss disease | |
dc.title | NCBI accession numbers for RNAseq data from five coral species experimentally exposed to Stony Coral Tissue Loss Disease (SCTLD) at the University of the Virgin Islands in 2019 | |
dc.type | Dataset | |
dspace.entity.type | Publication | |
relation.isAuthorOfPublication | 4b98e1e2-ecdf-41cb-9a35-7b28e949cdc6 | |
relation.isAuthorOfPublication.latestForDiscovery | 4b98e1e2-ecdf-41cb-9a35-7b28e949cdc6 |
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