18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020
18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020
dc.contributor.author | Hu, Sarah K. | |
dc.contributor.author | Huber, Julie | |
dc.coverage.spatial | Axial Seamount Juan de Fuca Ridge NE Pacific 46 N 130 W, Gorda Ridge NE Pacific 41 N 127 W, Mid-Cayman Rise Caribbean Sea 18 N 82 W | |
dc.coverage.spatial | westlimit: -82; southlimit: 18; eastlimit: -82; northlimit: 18 | |
dc.coverage.temporal | 20200114 - 20200205 (UTC) | |
dc.date.accessioned | 2023-11-06T16:20:19Z | |
dc.date.available | 2023-11-06T16:20:19Z | |
dc.date.created | 2023-11-06 | |
dc.date.issued | 2023-11-06 | |
dc.description | Dataset: Microbial eukaryotic diversity: Mid-Cayman Rise SRA dataset | |
dc.description.abstract | Single-celled microbial eukaryotes inhabit deep-sea hydrothermal vent environments and play critical ecological roles in the vent-associated microbial food web. 18S rRNA amplicon sequencing of diffuse venting fluids from two geochemically-distinct hydrothermal vent fields was applied to investigate community diversity patterns among protistan assemblages. Piccard and Von Damm vent fields are situated 20 km apart at the Mid-Cayman Rise in the Caribbean Sea. We describe species diversity patterns with respect to hydrothermal vent field and sample type, identify putative vent endemic microbial eukaryotes, and test how vent fluid geochemistry may influence microbial community diversity. Individual vent fields supported distinct and highly diverse assemblages of protists that included potentially endemic or novel vent-associated strains. This data adds to our growing knowledge of the biogeography of deep-sea microbial eukaryotes. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/914399 | |
dc.description.sponsorship | NSF Division of Ocean Sciences (NSF OCE) OCE-0939564 | |
dc.identifier.citation | Hu, S. K., & Huber, J. (2023). 18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020 (Version 1) [Data set]. Biological and Chemical Oceanography Data Management Office (BCO-DMO). https://doi.org/10.26008/1912/BCO-DMO.914399.1 | |
dc.identifier.doi | 10.26008/1912/bco-dmo.914399.1 | |
dc.identifier.uri | https://hdl.handle.net/1912/67156 | |
dc.language.iso | en_US | |
dc.publisher | Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu | |
dc.relation.uri | http://lod.bco-dmo.org/id/dataset/914399 | |
dc.relation.uri | https://doi.org/10.26008/1912/bco-dmo.914399.1 | |
dc.rights | Creative Commons Attribution 4.0 | |
dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ | |
dc.subject | protists | |
dc.subject | deep-sea hydrothermal vents | |
dc.subject | microeukaryotes | |
dc.title | 18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020 | |
dc.type | Dataset | |
dspace.entity.type | Publication |
Files
Original bundle
1 - 4 of 4
No Thumbnail Available
- Name:
- 914399_v1_sra.csv
- Size:
- 8.55 KB
- Format:
- Comma-separated values
- Description:
- Name:
- Dataset_description.pdf
- Size:
- 66.68 KB
- Format:
- Adobe Portable Document Format
- Description:
No Thumbnail Available
- Name:
- NOAA_ISO19115-2.xml
- Size:
- 67.04 KB
- Format:
- Extensible Markup Language
- Description:
No Thumbnail Available
- Name:
- metadata_dspace.xml
- Size:
- 150 B
- Format:
- Extensible Markup Language
- Description: