18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020

dc.contributor.author Hu, Sarah K.
dc.contributor.author Huber, Julie
dc.coverage.spatial Axial Seamount Juan de Fuca Ridge NE Pacific 46 N 130 W, Gorda Ridge NE Pacific 41 N 127 W, Mid-Cayman Rise Caribbean Sea 18 N 82 W
dc.coverage.spatial westlimit: -82; southlimit: 18; eastlimit: -82; northlimit: 18
dc.coverage.temporal 20200114 - 20200205 (UTC)
dc.date.accessioned 2023-11-06T16:20:19Z
dc.date.available 2023-11-06T16:20:19Z
dc.date.created 2023-11-06
dc.date.issued 2023-11-06
dc.description Dataset: Microbial eukaryotic diversity: Mid-Cayman Rise SRA dataset
dc.description.abstract Single-celled microbial eukaryotes inhabit deep-sea hydrothermal vent environments and play critical ecological roles in the vent-associated microbial food web. 18S rRNA amplicon sequencing of diffuse venting fluids from two geochemically-distinct hydrothermal vent fields was applied to investigate community diversity patterns among protistan assemblages. Piccard and Von Damm vent fields are situated 20 km apart at the Mid-Cayman Rise in the Caribbean Sea. We describe species diversity patterns with respect to hydrothermal vent field and sample type, identify putative vent endemic microbial eukaryotes, and test how vent fluid geochemistry may influence microbial community diversity. Individual vent fields supported distinct and highly diverse assemblages of protists that included potentially endemic or novel vent-associated strains. This data adds to our growing knowledge of the biogeography of deep-sea microbial eukaryotes. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/914399
dc.description.sponsorship NSF Division of Ocean Sciences (NSF OCE) OCE-0939564
dc.identifier.citation Hu, S. K., & Huber, J. (2023). 18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020 (Version 1) [Data set]. Biological and Chemical Oceanography Data Management Office (BCO-DMO). https://doi.org/10.26008/1912/BCO-DMO.914399.1
dc.identifier.doi 10.26008/1912/bco-dmo.914399.1
dc.identifier.uri https://hdl.handle.net/1912/67156
dc.language.iso en_US
dc.publisher Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
dc.relation.uri http://lod.bco-dmo.org/id/dataset/914399
dc.relation.uri https://doi.org/10.26008/1912/bco-dmo.914399.1
dc.rights Creative Commons Attribution 4.0
dc.rights.uri https://creativecommons.org/licenses/by/4.0/
dc.subject protists
dc.subject deep-sea hydrothermal vents
dc.subject microeukaryotes
dc.title 18S rRNA amplicon sequencing of microbial eukaryotes from the Mid-Cayman Rise acquired Jan-Feb, 2020
dc.type Dataset
dspace.entity.type Publication
Files
Original bundle
Now showing 1 - 4 of 4
No Thumbnail Available
Name:
914399_v1_sra.csv
Size:
8.55 KB
Format:
Comma-separated values
Description:
Thumbnail Image
Name:
Dataset_description.pdf
Size:
66.68 KB
Format:
Adobe Portable Document Format
Description:
No Thumbnail Available
Name:
NOAA_ISO19115-2.xml
Size:
67.04 KB
Format:
Extensible Markup Language
Description:
No Thumbnail Available
Name:
metadata_dspace.xml
Size:
150 B
Format:
Extensible Markup Language
Description: