de Lange Gert J.

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de Lange
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Gert J.
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  • Article
    Exploring preserved fossil dinoflagellate and haptophyte DNA signatures to infer ecological and environmental changes during deposition of sapropel S1 in the eastern Mediterranean
    (American Geophysical Union, 2011-04-16) Boere, Arjan C. ; Rijpstra, W. Irene C. ; de Lange, Gert J. ; Malinverno, Elisa ; Sinninghe Damste, Jaap S. ; Coolen, Marco J. L.
    In this study we used a comparative multiproxy survey (fossil DNA, calcareous nannofossils, and lipid biomarkers) to test whether preserved genetic signatures provide an accurate view of haptophyte and dinoflagellate populations during deposition of the eastern Mediterranean sapropel S1 and the organic carbon-depleted oxidized marls flanking the S1 and to see if we could identify important environmental indicator species that did not fossilize and escaped previous microscopic identification. The marls above and below the S1 contained low concentrations of lipid biomarkers diagnostic for dinoflagellates and haptophytes (i.e., dinosterol and long-chain alkenones), but 500 base pair long ribosomal DNA fragments of these protists were below the detection limit. In contrast, dinoflagellate and haptophyte DNA could be recovered from the organic carbon-rich S1, but the most abundant sequences did not represent species that were part of the nannofossil (this study) or previously described dinocyst composition. The oldest section of S1 (9.8 to ∼8 14C kyr B.P.) revealed a predominance of dinoflagellate phylotypes, which were previously only detected in anoxic Black Sea sediments. In the same section of the core, the most abundant haptophyte sequence showed highest similarity with uncultivated haptophytes that were previously shown to grow mixotrophically as predators of picocyanobacteria, an adaptation that promotes growth in oligotrophic marine waters. Sequences with highest similarities to clones found in marine surface waters predominated in the S1 after ∼8 14C kyr B.P. We discuss whether the shifts in haptophyte and dinoflagellate populations inferred from the preserved DNA reflect known environmental changes that occurred during the formation of sapropel S1.
  • Article
    Selective preservation of organic matter in marine environments; processes and impact on the sedimentary record
    (Copernicus Publications on behalf of the European Geosciences Union, 2010-02-05) Zonneveld, K. A. F. ; Versteegh, G. J. M. ; Kasten, S. ; Eglinton, Timothy I. ; Emeis, Kay-Christian ; Huguet, Carme ; Koch, Boris P. ; de Lange, Gert J. ; de Leeuw, J. W. ; Middelburg, Jack J. ; Mollenhauer, Gesine ; Prahl, Fredrick G. ; Rethemeyer, J. ; Wakeham, Stuart G.
    The present paper is the result of a workshop sponsored by the DFG Research Center/Cluster of Excellence MARUM "The Ocean in the Earth System", the International Graduate College EUROPROX, and the Alfred Wegener Institute for Polar and Marine Research. The workshop brought together specialists on organic matter degradation and on proxy-based environmental reconstruction. The paper deals with the main theme of the workshop, understanding the impact of selective degradation/preservation of organic matter (OM) in marine sediments on the interpretation of the fossil record. Special attention is paid to (A) the influence of the molecular composition of OM in relation to the biological and physical depositional environment, including new methods for determining complex organic biomolecules, (B) the impact of selective OM preservation on the interpretation of proxies for marine palaeoceanographic and palaeoclimatic reconstruction, and (C) past marine productivity and selective preservation in sediments. It appears that most of the factors influencing OM preservation have been identified, but many of the mechanisms by which they operate are partly, or even fragmentarily, understood. Some factors have not even been taken carefully into consideration. This incomplete understanding of OM breakdown hampers proper assessment of the present and past carbon cycle as well as the interpretation of OM based proxies and proxies affected by OM breakdown. To arrive at better proxy-based reconstructions "deformation functions" are needed, taking into account the transport and diagenesis-related molecular and atomic modifications following proxy formation. Some emerging proxies for OM degradation may shed light on such deformation functions. The use of palynomorph concentrations and selective changes in assemblage composition as models for production and preservation of OM may correct for bias due to selective degradation. Such quantitative assessment of OM degradation may lead to more accurate reconstruction of past productivity and bottom water oxygenation. Given the cost and effort associated with programs to recover sediment cores for paleoclimatological studies, as well as with generating proxy records, it would seem wise to develop a detailed sedimentological and diagenetic context for interpretation of these records. With respect to the latter, parallel acquisition of data that inform on the fidelity of the proxy signatures and reveal potential diagenetic biases would be of clear value.