Gomez-Chiarri Marta

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Gomez-Chiarri
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Marta
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  • Article
    Epizootiology of Quahog Parasite Unknown (QPX) disease in northern quahogs (=hard clams) Mercenaria mercenaria
    (National Shellfisheries Association, 2007-08) Lyons, M. Maille ; Smolowitz, Roxanna M. ; Gomez-Chiarri, Marta ; Ward, J. Evan
    The economically important marine bivalve mollusc, Mercenaria mercenaria, (commonly called a northern quahog or hard clam), has endured considerable mortalities caused by a thraustochytrid pathogen called Quahog Parasite X (QPX). Data on the percent prevalence of QPX infections were compiled from published reports along with our data to describe the epizootiology of QPX disease. QPX infections occurred in clams collected from both cultured beds and wild populations, but a higher percentage of QPX cases (76.5%) were from cultured clam beds. In addition, samples from cultured beds had a significantly higher prevalence (29.2 ± 27.2%) of QPX infections compared with samples from wild populations (9.6 ± 9.6%). The highest prevalence of QPX infections occurred in clams from samples with an intermediate size range (shell lengths 20–55 mm). QPX infections occurred in both male and female clams, but infection prevalence does not appear to be correlated with sex or sex ratios. The geographical range of QPX-related clam mortalities was Atlantic Canada to the Eastern Shore of Virginia, USA. Only marginally significant differences were detected between the prevalence of QPX at different locations. There were no latitudinal gradients in QPX prevalence or frequencies, suggesting local factors were important in determining its distribution. Although QPX infections occurred throughout the year, no seasonal trends in the prevalence or frequencies of QPX were discernable. This summary of information available on QPX disease highlights the need for more thorough data collection regarding factors believed to be associated with its presence and severity in hard clams.
  • Preprint
    Fundulus as the premier teleost model in environmental biology : opportunities for new insights using genomics
    ( 2007-09-01) Burnett, Karen G. ; Bain, Lisa J. ; Baldwin, William S. ; Callard, Gloria V. ; Cohen, Sarah ; Di Giulio, Richard T. ; Evans, David H. ; Gomez-Chiarri, Marta ; Hahn, Mark E. ; Hoover, Cindi A. ; Karchner, Sibel I. ; Katoh, Fumi ; MacLatchy, Deborah L. ; Marshall, William S. ; Meyer, Joel N. ; Nacci, Diane E. ; Oleksiak, Marjorie F. ; Rees, Bernard B. ; Singer, Thomas D. ; Stegeman, John J. ; Towle, David W. ; Van Veld, Peter A. ; Vogelbein, Wolfgang K. ; Whitehead, Andrew ; Winn, Richard N. ; Crawford, Douglas L.
    A strong foundation of basic and applied research documents that the estuarine fish Fundulus heteroclitus and related species are unique laboratory and field models for understanding how individuals and populations interact with their environment. In this paper we summarize an extensive body of work examining the adaptive responses of Fundulus species to environmental conditions, and describe how this research has contributed importantly to our understanding of physiology, gene regulation, toxicology, and ecological and evolutionary genetics of teleosts and other vertebrates. These explorations have reached a critical juncture at which advancement is hindered by the lack of genomic resources for these species. We suggest that a more complete genomics toolbox for F. heteroclitus and related species will permit researchers to exploit the power of this model organism to rapidly advance our understanding of fundamental biological and pathological mechanisms among vertebrates, as well as ecological strategies and evolutionary processes common to all living organisms.
  • Article
    Subtle microbiome manipulation using probiotics reduces antibiotic-associated mortality in fish
    (American Society for Microbiology, 2017-11-07) Schmidt, Victor T. ; Gomez-Chiarri, Marta ; Roy, Chelsea ; Smith, Katherine F. ; Amaral-Zettler, Linda A.
    Prophylactic antibiotics in the aquaculture and ornamental fish industry are intended to prevent the negative impacts of disease outbreaks. Research in mice and humans suggests that antibiotics may disturb microbiome communities and decrease microbiome-mediated disease resistance, also known as “colonization resistance.” If antibiotics impact fish as they do mice and humans, prophylactic administrations on aquaculture farms may increase downstream disease susceptibility in target hosts, despite short-term pathogen control benefits. We tested the effects of antibiotics on mortality after a pathogen challenge in the Poecilia sphenops black molly and subsequently tested if probiotic inoculations could reverse any antibiotic-induced losses of disease resistance. We found that antibiotic treatment significantly increased fish mortality. We further found that our two candidate probiotic bacterial species, Phaeobacter inhibens S4Sm and Bacillus pumilus RI06-95Sm, were able to colonize black molly microbiomes and reverse the negative impacts of antibiotics. Despite the positive impact on survival, probiotic treatment did not influence overall microbiome community structure or diversity. Our results suggest that subtle manipulations of microbiome composition can have dramatic impacts on host phenotype. The results of this study have implications for how antibiotic-treated microbiomes can be restored and suggest that small-scale additions may be as effective as wholesale transplants.