Stachowicz John J.

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Stachowicz
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John J.
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Start date: 2020 × End date: 2022 ×

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  • Dataset
    Quantitative PCR cell count estimates from samples of DNA extracted from seagrass wasting disease parasite, Labyrinthula zosterae from wasting disease mesocosm experiments at Bodega Marine Laboratory in July-Sept of 2015
    (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2022-11-22) Schenck, Forest ; DuBois, Katherine ; Kardish, Melissa ; Stachowicz, John J. ; Hughes, A. Randall
    This data set includes quantitative PCR cell count estimates from samples of DNA extracted from seagrass wasting disease parasite, Labyrinthula zosterae, cultures of known cell concentrations run with and without DNA extracted from seagrass, Zostera marina, tissue samples to test for quantitative PCR signal inhibition. Seagrass tissue samples were collected as part of a mesocosm study at the Bodega Marine Laboratory examining the independent and interactive effects of warming, host genotypic identity, and host genotypic diversity on the prevalence and intensity of infections of seagrass by the wasting disease parasite L. zosterae. These data were plotted in Schenck et al (2022) as Figure S6. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/883055
  • Dataset
    Abiotic and biotic data from Zostera Experimental Network (ZEN) 2014 surveys (ZEN 2 project)
    (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2021-04-19) Duffy, J Emmett ; Hovel, Kevin ; Stachowicz, John J. ; Reynolds, Pamela L
    This dataset includes biomass and diversity measurements of eelgrass communities from 50 sites across the Northern Hemisphere. The purpose was to study the plant and animal responses to top-down and bottom-up manipulations in eelgrass (Zostera marina) habitat. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/712069
  • Dataset
    Eelgrass shoot metrics from ecological field surveys in six regions along the eastern Pacific coast in June through August of 2019, 2020, and 2021.
    (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2022-10-21) Harvell, Drew ; Gomes, Carla P. ; Hawthorne, Timothy ; Stachowicz, John J. ; Duffy, J. Emmett ; Aoki, Lillian
    These data were collected during ecological field surveys of eelgrass (Zostera marina) meadows along the eastern Pacific from southeastern Alaska to southern California. Parameters measured include seagrass morphology, meadow condition (e.g. shoot densities), and incidence and severity of eelgrass wasting disease. Data were collected within the intertidal area of 32 eelgrass meadows distributed in six regions (five-six meadows sampled in the regions of Alaska, British Columbia, Washington, Oregon, California - Bodega Bay, and California - San Diego). Surveys were conducted in between late June and early August in 2019, 2020, and 2021 by teams from six institutions. The influence of disease on seagrass dynamics is not well understood, and these data can further understanding of the environmental drivers of disease by connecting wasting disease with eelgrass condition across a broad geographic gradient. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/878857
  • Dataset
    Seagrass metrics from from seagrass wasting disease mesocosm experiments conducted at Bodega Marine Laboratory from July-September 2015
    (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2022-11-22) Schenck, Forest ; DuBois, Katherine ; Kardish, Melissa ; Stachowicz, John J. ; Hughes, A. Randall
    This dataset includes seagrass metrics (diversity, biomass, growth, and wasting disease) from mesocosm experiments at Bodega Marine Laboratory in July-September 2015. Data were collected as part of a mesocosm study at the Bodega Marine Laboratory examining the independent and interactive effects of warming, host genotypic identity, and host genotypic diversity on the prevalence and intensity of infections of seagrass by the wasting disease parasite Labyrinthula zosterae. These data were published in Schenck et al (2022). For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/879749
  • Dataset
    Eelgrass disease metrics from ecological field surveys along the eastern Pacific coast in June through August of 2019, 2020, and 2021.
    (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2022-10-21) Harvell, Drew ; Gomes, Carla P. ; Hawthorne, Timothy ; Stachowicz, John J. ; Duffy, J. Emmett ; Aoki, Lillian
    These data were collected during ecological field surveys of eelgrass (Zostera marina) meadows along the eastern Pacific from southeastern Alaska to southern California. Parameters measured include seagrass morphology, meadow condition (e.g. shoot densities), and incidence and severity of eelgrass wasting disease. Data were collected within the intertidal area of 32 eelgrass meadows distributed in six regions (five-six meadows sampled in the regions of Alaska, British Columbia, Washington, Oregon, California - Bodega Bay, and California - San Diego). Surveys were conducted in between late June and early August in 2019, 2020, and 2021 by teams from six institutions. The influence of disease on seagrass dynamics is not well understood, and these data can further understanding of the environmental drivers of disease by connecting wasting disease with eelgrass condition across a broad geographic gradient. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/879780
  • Dataset
    Experimental results of tethered amphipod and isopod survival in global eelgrass habitats, summer 2015 (Zostera Experimental Network 2; ZEN2)
    (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2021-04-19) Hovel, Kevin ; Duffy, J Emmett ; Stachowicz, John J.
    This dataset includes survival of tethered amphipods and isopods in eelgrass plots, and the biomass of other organisms in the plots. The eelgrass beds were located globally. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/724015
  • Dataset
    In situ temperature measurements from eelgrass meadow field sites along the west coast of North America recorded from July 2019 to July 2021
    (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2022-10-21) Harvell, Drew ; Gomes, Carla P. ; Hawthorne, Timothy ; Stachowicz, John J. ; Duffy, J. Emmett ; Aoki, Lillian
    As part of field surveys to measure effects of eelgrass wasting disease, HOBO temperature loggers were deployed from July 2019 to July 2021 at field sites along the west coast of North America to provide a continuous record of in situ temperatures. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/877355
  • Dataset
    Microbial taxa (amplicon sequence variant or ASV) statistical analyses for two seagrass genotypes from wasting disease mesocosm experiments at Bodega Marine Laboratory in July-Sept of 2015
    (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2022-11-22) Schenck, Forest ; DuBois, Katherine ; Kardish, Melissa ; Stachowicz, John J. ; Hughes, A. Randall
    This dataset includes outputs from statistical analyses of differences in microbial taxa (amplicon sequence variant or ASV) abundance among two groups of seagrass, Zostera marina, genotypes: those that showed reduced Labyrinthula zosterae parasites when warmed vs those that showed increased L. zosterae parasites when warmed; and two seawater temperature treatments: ambient or elevated +3.2oC. Data were collected as part of a mesocosm study at the Bodega Marine Laboratory examining the independent and interactive effects of warming, host genotypic identity, and host genotypic diversity on the prevalence and intensity of infections of seagrass by the wasting disease parasite L. zosterae. These data were published in Schenck et al (2022). Related sequence data from this experiment is accessible from the National Center for Biotechnology Information (NCBI) BioProject PRJNA716355. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/883070
  • Dataset
    Temperature from seagrass wasting disease mesocosm experiments at Bodega Marine Laboratory in June-July 2015
    (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2022-11-22) Schenck, Forest ; DuBois, Katherine ; Kardish, Melissa ; Stachowicz, John J. ; Hughes, A. Randall
    This dataset includes seawater temperature measurements from mesocosms. Data were collected as part of a mesocosm study at the Bodega Marine Laboratory examining the independent and interactive effects of warming, host genotypic identity, and host genotypic diversity on the prevalence and intensity of infections of seagrass by the wasting disease parasite Labyrinthula zosterae. These data were plotted in Schenck et al (2022) as Figure S1. And Bois et al., 2021 as Figure 1. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/883037
  • Dataset
    Eelgrass shoot density measurements taken during ecological field surveys along the eastern Pacific coast in June through August of 2019, 2020, and 2021.
    (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2022-10-21) Harvell, Drew ; Gomes, Carla P. ; Hawthorne, Timothy ; Stachowicz, John J. ; Duffy, J. Emmett ; Aoki, Lillian
    These data were collected during ecological field surveys of eelgrass (Zostera marina) meadows along the eastern Pacific from southeastern Alaska to southern California. Parameters measured include seagrass morphology, meadow condition (e.g. shoot densities), and incidence and severity of eelgrass wasting disease. Data were collected within the intertidal area of 32 eelgrass meadows distributed in six regions (five-six meadows sampled in the regions of Alaska, British Columbia, Washington, Oregon, California - Bodega Bay, and California - San Diego). Surveys were conducted in between late June and early August in 2019, 2020, and 2021 by teams from six institutions. The influence of disease on seagrass dynamics is not well understood, and these data can further understanding of the environmental drivers of disease by connecting wasting disease with eelgrass condition across a broad geographic gradient. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/879764