Wall-Palmer Deborah

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Last Name
Wall-Palmer
First Name
Deborah
ORCID
0000-0003-2356-6122

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  • Article
    Toward a global reference database of COI barcodes for marine zooplankton
    (Springer, 2021-05-04) Bucklin, Ann ; Peijnenburg, Katja T. C. A. ; Kosobokova, Ksenia N. ; O'Brien, Todd D. ; Blanco-Bercial, Leocadio ; Cornils, Astrid ; Falkenhaug, Tone ; Hopcroft, Russell R. ; Hosia, Aino ; Laakmann, Silke ; Li, Chaolun ; Martell, Luis ; Questel, Jennifer M. ; Wall-Palmer, Deborah ; Wang, Minxiao ; Wiebe, Peter ; Weydmann-Zwolicka, Agata
    Characterization of species diversity of zooplankton is key to understanding, assessing, and predicting the function and future of pelagic ecosystems throughout the global ocean. The marine zooplankton assemblage, including only metazoans, is highly diverse and taxonomically complex, with an estimated ~28,000 species of 41 major taxonomic groups. This review provides a comprehensive summary of DNA sequences for the barcode region of mitochondrial cytochrome oxidase I (COI) for identified specimens. The foundation of this summary is the MetaZooGene Barcode Atlas and Database (MZGdb), a new open-access data and metadata portal that is linked to NCBI GenBank and BOLD data repositories. The MZGdb provides enhanced quality control and tools for assembling COI reference sequence databases that are specific to selected taxonomic groups and/or ocean regions, with associated metadata (e.g., collection georeferencing, verification of species identification, molecular protocols), and tools for statistical analysis, mapping, and visualization. To date, over 150,000 COI sequences for ~ 5600 described species of marine metazoan plankton (including holo- and meroplankton) are available via the MZGdb portal. This review uses the MZGdb as a resource for summaries of COI barcode data and metadata for important taxonomic groups of marine zooplankton and selected regions, including the North Atlantic, Arctic, North Pacific, and Southern Oceans. The MZGdb is designed to provide a foundation for analysis of species diversity of marine zooplankton based on DNA barcoding and metabarcoding for assessment of marine ecosystems and rapid detection of the impacts of climate change.
  • Article
    Shelled pteropods in peril : assessing vulnerability in a high CO2 ocean
    (Elsevier, 2017-04-09) Manno, Clara ; Bednarsek, Nina ; Tarling, Geraint A. ; Peck, Vicky L. ; Comeau, Steeve ; Adhikari, Deepak ; Bakker, Dorothee ; Bauerfeind, Eduard ; Bergan, Alexander J. ; Berning, Maria I. ; Buitenhuis, Erik T. ; Burridge, Alice K. ; Chierici, Melissa ; Flöter, Sebastian ; Fransson, Agneta ; Gardner, Jessie ; Howes, Ella L. ; Keul, Nina ; Kimoto, Katsunori ; Kohnert, Peter ; Lawson, Gareth L. ; Lischka, Silke ; Maas, Amy E. ; Mekkes, Lisette ; Oakes, Rosie L. ; Pebody, Corinne ; Peijnenburg, Katja T. C. A. ; Seifert, Miriam ; Skinner, Jennifer ; Thibodeau, Patricia S. ; Wall-Palmer, Deborah ; Ziveri, Patrizia
    The impact of anthropogenic ocean acidification (OA) on marine ecosystems is a vital concern facing marine scientists and managers of ocean resources. Euthecosomatous pteropods (holoplanktonic gastropods) represent an excellent sentinel for indicating exposure to anthropogenic OA because of the sensitivity of their aragonite shells to the OA conditions less favorable for calcification. However, an integration of observations, experiments and modelling efforts is needed to make accurate predictions of how these organisms will respond to future changes to their environment. Our understanding of the underlying organismal biology and life history is far from complete and must be improved if we are to comprehend fully the responses of these organisms to the multitude of stressors in their environment beyond OA. This review considers the present state of research and understanding of euthecosomatous pteropod biology and ecology of these organisms and considers promising new laboratory methods, advances in instrumentation (such as molecular, trace elements, stable isotopes, palaeobiology alongside autonomous sampling platforms, CT scanning and high-quality video recording) and novel field-based approaches (i.e. studies of upwelling and CO2 vent regions) that may allow us to improve our predictive capacity of their vulnerability and/or resilience. In addition to playing a critical ecological and biogeochemical role, pteropods can offer a significant value as an early-indicator of anthropogenic OA. This role as a sentinel species should be developed further to consolidate their potential use within marine environmental management policy making.