Ecosystems Center

Article

Nitrogen fixation associated with epiphytes on the seagrass Zostera marina in a temperate lagoon with moderate to high nitrogen loads

(Springer, 2023-10-09) Marino, Roxanne ; Hayn, Melanie ; Howarth, Robert W. ; Giblin, Anne E. ; McGlathery, Karen J. ; Berg, Peter

As part of a long-term study on the effects of nitrogen (N) loading in a shallow temperate lagoon, we measured rates of N2 fixation associated with seagrass (Zostera marina) epiphytes during the summer from 2005 to 2019, at two sites along a gradient from where high N groundwater enters the system (denoted SH) to a more well-flushed outer harbor (OH). The data presented here are the first such long-term N2 fixation estimates for any seagrass system and one of the very few reported for the phyllosphere in a temperate system. Mean daily N2 fixation was estimated from light and dark measurements using the acetylene reduction assay intercalibrated using both incorporation of 15N2 into biomass and a novel application of the N2:Ar method. Surprisingly, despite a large inorganic N input from a N-contaminated groundwater plume, epiphytic N2 fixation rates were moderately to very high for a seagrass system (OH site 14-year mean of 0.94 mmol N m−2 d−1), with the highest rates (2.6 mmol N m−2 d−1) measured at the more N-loaded eutrophic site (SH) where dissolved inorganic N was higher and soluble reactive phosphorus was lower than in the better-flushed OH. Over 95% of the total N2 fixation measured was in the light, suggesting the importance of cyanobacteria in the epiphyte assemblages. We observed large inter-annual variation both within and across the two study sites (range from 0.1 to 2.6 mmol N fixed m−2 d−1), which we suggest is in part related to climatic variation. We estimate that input from phyllosphere N2 fixation over the study period contributes on average an additional 20% to the total daily N load per area within the seagrass meadow.

Article

Hydrogen and dark oxygen drive microbial productivity in diverse groundwater ecosystems

(Nature Research, 2023-06-13) Ruff, S. Emil ; Humez, Pauline ; Hrabe de Angelis, Isabella ; Diao, Muhe ; Nightingale, Michael ; Cho, Sara ; Connors, Liam ; Kuloyo, Olukayode O. ; Seltzer, Alan ; Bowman, Samuel ; Wankel, Scott D. ; McClain, Cynthia N. ; Mayer, Bernhard ; Strous, Marc

Around 50% of humankind relies on groundwater as a source of drinking water. Here we investigate the age, geochemistry, and microbiology of 138 groundwater samples from 95 monitoring wells (<250 m depth) located in 14 aquifers in Canada. The geochemistry and microbiology show consistent trends suggesting large-scale aerobic and anaerobic hydrogen, methane, nitrogen, and sulfur cycling carried out by diverse microbial communities. Older groundwaters, especially in aquifers with organic carbon-rich strata, contain on average more cells (up to 1.4 × 107 mL−1) than younger groundwaters, challenging current estimates of subsurface cell abundances. We observe substantial concentrations of dissolved oxygen (0.52 ± 0.12 mg L−1 [mean ± SE]; n = 57) in older groundwaters that seem to support aerobic metabolisms in subsurface ecosystems at an unprecedented scale. Metagenomics, oxygen isotope analyses and mixing models indicate that dark oxygen is produced in situ via microbial dismutation. We show that ancient groundwaters sustain productive communities and highlight an overlooked oxygen source in present and past subsurface ecosystems of Earth.