Cephalopod-omics: emerging fields and technologies in cephalopod biology

dc.contributor.author Baden, Tom
dc.contributor.author Briseno, John
dc.contributor.author Coffing, Gabrielle
dc.contributor.author Cohen-Bodenes, Sophie
dc.contributor.author Courtney, Amy
dc.contributor.author Dickerson, Dominick
dc.contributor.author Dolen, Gul
dc.contributor.author Fiorito, Graziano
dc.contributor.author Gestal, Camino
dc.contributor.author Gustafson, Taryn
dc.contributor.author Heath-Heckman, Elizabeth
dc.contributor.author Hua, Qiaz
dc.contributor.author Imperadore, Pamela
dc.contributor.author Kimbara, Ryosuke
dc.contributor.author Krol, Mirela
dc.contributor.author Lajbner, Zdenek
dc.contributor.author Lichilín, Nicolas
dc.contributor.author Macchi, Filippo
dc.contributor.author McCoy, Matthew J.
dc.contributor.author Nishiguchi, Michele K.
dc.contributor.author Nyholm, Spencer V.
dc.contributor.author Otjacques, Eve
dc.contributor.author Perez-Ferrer, Pedro Antonio
dc.contributor.author Ponte, Giovanna
dc.contributor.author Pungor, Judit R.
dc.contributor.author Rogers, Thea F.
dc.contributor.author Rosenthal, Joshua J. C.
dc.contributor.author Rouressol, Lisa
dc.contributor.author Rubas, Noelle
dc.contributor.author Sanchez, Gustavo
dc.contributor.author Santos, Catarina Pereira
dc.contributor.author Schultz, Darrin T.
dc.contributor.author Seuntjens,Eve
dc.contributor.author Songco-Casey, Jeremea O.
dc.contributor.author Stewart, Ian Erik
dc.contributor.author Styfhals, Ruth
dc.contributor.author Tuanapaya, Surangkana
dc.contributor.author Vijayan, Nidhi
dc.contributor.author Weissenbacher, Anton
dc.contributor.author Zifcakova, Lucia
dc.contributor.author Schulz, Grace
dc.contributor.author Weertman, Willem
dc.contributor.author Simakov, Oleg
dc.contributor.author Albertin, Caroline B.
dc.date.accessioned 2024-07-11T14:37:56Z
dc.date.available 2024-07-11T14:37:56Z
dc.date.issued 2023-06-27
dc.description © The Author(s), 2023. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Baden, T., Briseño, J., Coffing, G., Cohen-Bodénès, S., Courtney, A., Dickerson, D., Dölen, G., Fiorito, G., Gestal, C., Gustafson, T., Heath-Heckman, E., Hua, Q., Imperadore, P., Kimbara, R., Król, M., Lajbner, Z., Lichilín, N., Macchi, F., McCoy, M. J., Nishiguchi, M. K., Nyholm, S. V., Otjacques, E., Pérez-Ferrer, P. A., Ponte, G., Pungor, J. R., Rogers, T. F., Rosenthal, J. J. C., Rouressol, L., Rubas, N., Sanchez, G., Santos, C. P., Schultz, D. T., Seuntjens, E., Songco-Casey, J. O., Stewart, I. E., Styfhals, R., Tuanapaya, S., Vijayan, N., Weissenbacher, A., Zifcakova, L., Schulz, G., Weertman, W., Simakov, O., & Albertin, C. (2023). Cephalopod-omics: emerging fields and technologies in cephalopod biology. Integrative and Comparative Biology, 63(6), 1226-1239, https://doi.org/10.1093/icb/icad087.
dc.description.abstract Few animal groups can claim the level of wonder that cephalopods instill in the minds of researchers and the general public. Much of cephalopod biology, however, remains unexplored: the largest invertebrate brain, difficult husbandry conditions, and complex (meta-)genomes, among many other things, have hindered progress in addressing key questions. However, recent technological advancements in sequencing, imaging, and genetic manipulation have opened new avenues for exploring the biology of these extraordinary animals. The cephalopod molecular biology community is thus experiencing a large influx of researchers, emerging from different fields, accelerating the pace of research in this clade. In the first post-pandemic event at the Cephalopod International Advisory Council (CIAC) conference in April 2022, over 40 participants from all over the world met and discussed key challenges and perspectives for current cephalopod molecular biology and evolution. Our particular focus was on the fields of comparative and regulatory genomics, gene manipulation, single-cell transcriptomics, metagenomics, and microbial interactions. This article is a result of this joint effort, summarizing the latest insights from these emerging fields, their bottlenecks, and potential solutions. The article highlights the interdisciplinary nature of the cephalopod-omics community and provides an emphasis on continuous consolidation of efforts and collaboration in this rapidly evolving field.
dc.identifier.citation Baden, T., Briseño, J., Coffing, G., Cohen-Bodénès, S., Courtney, A., Dickerson, D., Dölen, G., Fiorito, G., Gestal, C., Gustafson, T., Heath-Heckman, E., Hua, Q., Imperadore, P., Kimbara, R., Król, M., Lajbner, Z., Lichilín, N., Macchi, F., McCoy, M. J., Nishiguchi, M. K., Nyholm, S. V., Otjacques, E., Pérez-Ferrer, P. A., Ponte, G., Pungor, J. R., Rogers, T. F., Rosenthal, J. J. C., Rouressol, L., Rubas, N., Sanchez, G., Santos, C. P., Schultz, D. T., Seuntjens, E., Songco-Casey, J. O., Stewart, I. E., Styfhals, R., Tuanapaya, S., Vijayan, N., Weissenbacher, A., Zifcakova, L., Schulz, G., Weertman, W., Simakov, O., & Albertin, C. (2023). Cephalopod-omics: emerging fields and technologies in cephalopod biology. Integrative and Comparative Biology, 63(6), 1226-1239.
dc.identifier.doi 10.1093/icb/icad087
dc.identifier.uri https://hdl.handle.net/1912/69724
dc.publisher Oxford University Press
dc.relation.uri https://doi.org/10.1093/icb/icad087
dc.rights Attribution 4.0 International
dc.rights.uri http://creativecommons.org/licenses/by/4.0/
dc.title Cephalopod-omics: emerging fields and technologies in cephalopod biology
dc.type Article
dspace.entity.type Publication
relation.isAuthorOfPublication 5a8cc4a1-1e53-4c23-bcd0-402028e94818
relation.isAuthorOfPublication.latestForDiscovery 5a8cc4a1-1e53-4c23-bcd0-402028e94818
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