Transcriptome responses in copepods Calanus finmarchicus, Calanus glacialis and Calanus hyperboreus exposed to phenanthrene and benzo[a]pyrene

dc.contributor.author Yadetie, Fekadu
dc.contributor.author Brun, Nadja R.
dc.contributor.author Giebichenstein, Julia
dc.contributor.author Dmoch, Katarzyna
dc.contributor.author Hylland, Ketil
dc.contributor.author Borgå, Katrine
dc.contributor.author Karlsen, Odd André
dc.contributor.author Goksøyr, Anders
dc.date.accessioned 2023-04-20T15:41:15Z
dc.date.available 2023-04-20T15:41:15Z
dc.date.issued 2022-08-12
dc.description © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Yadetie, F., Brun, N. R., Giebichenstein, J., Dmoch, K., Hylland, K., Borga, K., Karlsen, O. A., & Goksoyr, A. Transcriptome responses in copepods Calanus finmarchicus, Calanus glacialis and Calanus hyperboreus exposed to phenanthrene and benzo[a]pyrene. Marine Genomics, 65, (2022): 100981, https://doi.org/10.1016/j.margen.2022.100981.
dc.description.abstract Arctic and sub-arctic pelagic organisms can be exposed to effluents and spills from offshore petroleum-related activities and thus it is important to understand how they respond to crude oil related contaminants such as polycyclic aromatic hydrocarbons (PAHs). The copepod species Calanus finmarchicus, Calanus glacialis and Calanus hyperboreus represent key links in the arctic marine food web. We performed a transcriptome analysis of the three species exposed to phenanthrene (Phe) and benzo[a]pyrene (BaP) representing low and high molecular weight PAHs, respectively. Differential expression of several genes involved in many cellular pathways was observed after 72 h exposure to Phe (0.1 μM) and BaP (0.1 μM). In C. finmarchicus and C. glacialis, the exposure resulted in up-regulation of genes encoding enzymes in xenobiotic biotransformation, particularly the phase II cytosolic sulfonation system that include 3′-phosphoadenosine 5′-phosphosulfate synthase (PAPSS) and sulfotransferases (SULTs). The sulfonation pathway genes were more strongly induced by BaP than Phe in C. finmarchicus and C. glacialis but were not affected in C. hyperboreus. However, a larger number of genes and pathways were modulated in C. hyperboreus by the PAHs including genes encoding xenobiotic biotransformation and lipid metabolism enzymes, suggesting stronger responses in this species. The results suggest that the cytosolic sulfonation is a major phase II conjugation pathway for PAHs in C. finmarchicus and C. glacialis. Some of the biotransformation systems affected are known to be involved in metabolism of endogenous compounds such as ecdysteroids, which may suggest potential interference with physiological and developmental processes of the copepod species.[Display omitted]•Characterized transcriptome responses in three Calanus species exposed to phenanthrene (Phe) and benzo[a]pyrene (BaP).•Many xenobiotic biotransformation genes and pathways were affected by Phe and BaP in the three species.•Genes in sulfonation system were up-regulated by Phe and BaP in C. finmarchicus and C. glacialis.•A larger number of other pathways such as lipid metabolism were modulated in Phe and BaP exposed C. hyperboreus.
dc.description.sponsorship The study was funded by the Research Council of Norway, through the Nansen Legacy Project (276730).
dc.identifier.citation Yadetie, F., Brun, N. R., Giebichenstein, J., Dmoch, K., Hylland, K., Borga, K., Karlsen, O. A., & Goksoyr, A. (2022). Transcriptome responses in copepods Calanus finmarchicus, Calanus glacialis and Calanus hyperboreus exposed to phenanthrene and benzo[a]pyrene. Marine Genomics, 65, 100981.
dc.identifier.doi 10.1016/j.margen.2022.100981
dc.identifier.uri https://hdl.handle.net/1912/65990
dc.publisher Elsevier
dc.relation.uri https://doi.org/10.1016/j.margen.2022.100981
dc.rights Creative Commons Attribution 4.0
dc.rights.uri https://creativecommons.org/licenses/by/4.0/
dc.subject Zooplankton
dc.subject Polycyclic aromatic hydrocarbon
dc.subject Biotransformation
dc.subject Sulfonation
dc.subject RNA-seq
dc.title Transcriptome responses in copepods Calanus finmarchicus, Calanus glacialis and Calanus hyperboreus exposed to phenanthrene and benzo[a]pyrene
dc.type Article
dspace.entity.type Publication
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relation.isAuthorOfPublication.latestForDiscovery 06380d8a-c121-45c6-90cf-7ccea7368169
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