Lipid metabolism in Calanus finmarchicus is sensitive to variations in predation risk and food availability

dc.contributor.author Skottene, Elise
dc.contributor.author Tarrant, Ann M.
dc.contributor.author Altin, Dag
dc.contributor.author Olsen, Rolf Erik
dc.contributor.author Choquet, Marvin
dc.contributor.author Kvile, Kristina Øie
dc.date.accessioned 2021-03-24T21:01:09Z
dc.date.available 2021-03-24T21:01:09Z
dc.date.issued 2020-12-18
dc.description © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Skottene, E., Tarrant, A. M., Altin, D., Olsen, R. E., Choquet, M., & Kvile, K. O. Lipid metabolism in Calanus finmarchicus is sensitive to variations in predation risk and food availability. Scientific Reports, 10(1),(2020): 22322, https://doi.org/10.1038/s41598-020-79165-6. en_US
dc.description.abstract Late developmental stages of the marine copepods in the genus Calanus can spend extended periods in a dormant stage (diapause) that is preceded by the accumulation of large lipid stores. We assessed how lipid metabolism during development from the C4 stage to adult is altered in response to predation risk and varying food availability, to ultimately understand more of the metabolic processes during development in Calanus copepods. We used RNA sequencing to assess if perceived predation risk in combination with varied food availability affects expression of genes associated with lipid metabolism and diapause preparation in C. finmarchicus. The lipid metabolism response to predation risk differed depending on food availability, time and life stage. Predation risk caused upregulation of lipid catabolism with high food, and downregulation with low food. Under low food conditions, predation risk disrupted lipid accumulation. The copepods showed no clear signs of diapause preparation, supporting earlier observations of the importance of multiple environmental cues in inducing diapause in C. finmarchicus. This study demonstrates that lipid metabolism is a sensitive endpoint for the interacting environmental effects of predation pressure and food availability. As diapause may be controlled by lipid accumulation, our findings may contribute towards understanding processes that can ultimately influence diapause timing. en_US
dc.description.sponsorship ES was funded by the Department of Biology, Norwegian University of Science and Technology. Support for AMT was provided by the National Science Foundation (NSF) OPP-1746087. KØK was funded by VISTA—a basic research program in collaboration between The Norwegian Academy of Science and Letters, and Equinor. The RNA seq work was provided by the Genomics Core Facility (GCF). GCF is funded by the Faculty of Medicine and Health Sciences at NTNU and Central Norway Regional Health Authority. The authors thank Lotte Thommesen for help conducting the experiment, Mari-Ann Østensen for performing RNA extraction with ES and preparing cDNA libraries for Illumina RNAseq, and the EMBRC-ERIC Laboratory for Low Level Trophic Interactions at NTNU SeaLab for access to the Calanus finmarchicus culture. en_US
dc.identifier.citation Skottene, E., Tarrant, A. M., Altin, D., Olsen, R. E., Choquet, M., & Kvile, K. O. (2020). Lipid metabolism in Calanus finmarchicus is sensitive to variations in predation risk and food availability. Scientific Reports, 10(1), 22322. en_US
dc.identifier.doi 10.1038/s41598-020-79165-6
dc.identifier.uri https://hdl.handle.net/1912/26865
dc.publisher Nature Research en_US
dc.relation.uri https://doi.org/10.1038/s41598-020-79165-6
dc.rights Attribution 4.0 International *
dc.rights.uri http://creativecommons.org/licenses/by/4.0/ *
dc.title Lipid metabolism in Calanus finmarchicus is sensitive to variations in predation risk and food availability en_US
dc.type Article en_US
dspace.entity.type Publication
relation.isAuthorOfPublication be464d15-65c3-426b-a386-bc5937024c75
relation.isAuthorOfPublication 2a9f5258-595d-4bde-91c1-560a93338c7b
relation.isAuthorOfPublication b93c2a34-fdda-4286-b7a5-6df97c9aa371
relation.isAuthorOfPublication e3a2b7e0-cd5e-4e3c-9a33-3b428eb9c9c4
relation.isAuthorOfPublication 0bab982a-6265-4661-8a59-6d307c65e34c
relation.isAuthorOfPublication 3052dc40-945a-4885-a59b-e94f43e6c711
relation.isAuthorOfPublication.latestForDiscovery be464d15-65c3-426b-a386-bc5937024c75
Files
Original bundle
Now showing 1 - 5 of 9
Thumbnail Image
Name:
s41598-020-79165-6.pdf
Size:
1.78 MB
Format:
Adobe Portable Document Format
Description:
Article
Thumbnail Image
Name:
41598_2020_79165_MOESM1_ESM.pdf
Size:
314.35 KB
Format:
Adobe Portable Document Format
Description:
Supplementary_Information
No Thumbnail Available
Name:
41598_2020_79165_MOESM2_ESM.xlsx
Size:
15.21 KB
Format:
Microsoft Excel
Description:
Supplementary_Table_1
No Thumbnail Available
Name:
41598_2020_79165_MOESM3_ESM.xlsx
Size:
27.04 KB
Format:
Microsoft Excel
Description:
Supplementary_Table_2
No Thumbnail Available
Name:
41598_2020_79165_MOESM4_ESM.xlsx
Size:
33.96 KB
Format:
Microsoft Excel
Description:
Supplementary_Table_3
License bundle
Now showing 1 - 1 of 1
No Thumbnail Available
Name:
license.txt
Size:
1.88 KB
Format:
Item-specific license agreed upon to submission
Description:
Collections