Ralston
David K.
Ralston
David K.
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PreprintDynamics of Alexandrium fundyense blooms and shellfish toxicity in the Nauset Marsh System of Cape Cod (Massachusetts, USA)( 2011-08) Crespo, Bibiana G. ; Keafer, Bruce A. ; Ralston, David K. ; Lind, Henry ; Farber, Dawson ; Anderson, Donald M.Paralytic Shellfish Poisoning (PSP) toxins are annually recurrent along the Massachusetts coastline (USA), which includes many small embayments and salt ponds. Among these is the Nauset Marsh System (NMS), which has a long history of PSP toxicity. Little is known, however, about the bloom dynamics of the causative organism Alexandrium fundyense within that economically and socially important system. The overall goal of this work was to characterize the distribution and dynamics of A. fundyense blooms within the NMS and adjacent coastal waters by documenting the distribution and abundance of resting cysts and vegetative cells. Cysts were found predominantly in three drowned kettle holes or salt ponds at the distal ends of the NMS - Salt Pond, Mill Pond, and Town Cove. The central region of the NMS had a much lower concentration of cysts. Two types of A. fundyense blooms were observed. One originated entirely within the estuary, seeded by cysts in the three seedbeds. These blooms developed independently of each other and of the A. fundyense population observed in adjacent coastal waters outside the NMS. The temporal development of the blooms was different in the three salt ponds, with initiation differing by as much as 30 days. These differences do not appear to reflect the initial cyst abundances in these locations, and may simply result from higher cell retention and higher nutrient concentrations in Mill Pond, the first site to bloom. Germination of cysts accounted for a small percentage of the peak cell densities in the ponds, so population size was influenced more by the factors affecting growth than by cyst abundance. Subsurface cell aggregation (surface avoidance) limited advection of the vegetative A. fundyense cells out of the salt ponds through the shallow inlet channels. Thus, the upper reaches of the NMS are at the greatest risk for PSP since the highest cyst abundances and cell concentrations were found there. After these localized blooms in the salt ponds peaked and declined, a second, late season bloom occurred within the central portions of the NMS. The timing of this second bloom relative to those within the salt ponds and the coastal circulation patterns at that time strongly suggest that those cells originated from a regional A. fundyense bloom in the Gulf of Maine, delivered to the central marsh from coastal waters outside the NMS through Nauset Inlet. These results will guide policy decisions about water quality as well as shellfish monitoring and utilization within the NMS and highlight the potential for “surgical” closures of shellfish during PSP events, leaving some areas open for harvesting while others are closed.
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PreprintWaves in the Red Sea : response to monsoonal and mountain gap winds( 2013-05-30) Ralston, David K. ; Jiang, Houshuo ; Farrar, J. ThomasAn unstructured grid, phase-averaged wave model forced with winds from a high resolution atmospheric model is used to evaluate wind wave conditions in the Red Sea over an approximately 2-year period. The Red Sea lies in a narrow rift valley, and the steep topography surrounding the basin steers the dominant wind patterns and consequently the wave climate. At large scales, the model results indicated that the primary seasonal variability in waves was due to the monsoonal wind reversal. During the winter, monsoon winds from the southeast generated waves with mean significant wave heights in excess of 2 m and mean periods of 8 s in the southern Red Sea, while in the northern part of the basin waves were smaller, shorter period, and from northwest. The zone of convergence of winds and waves typically occurred around 19-20˚N, but the location varied between 15 to 21.5˚N. During the summer, waves were generally smaller and from the northwest over most of the basin. While the seasonal winds oriented along the axis of the Red Sea drove much of the variability in the waves, the maximum wave heights in the simulations were not due to the monsoonal winds but instead were generated by localized mountain wind jets oriented across the basin (roughly east-west). During the summer, a mountain wind jet from the Tokar Gap enhanced the waves in the region of 18 and 20˚N, with monthly mean wave heights exceeding 2 m and maximum wave heights of 14 m during a period when the rest of the Red Sea was relatively calm. Smaller mountain gap wind jets along the northeast coast created large waves during the fall and winter, with a series of jets providing a dominant source of wave energy during these periods. Evaluation of the wave model results against observations from a buoy and satellites found that the spatial resolution of the wind model significantly affected the quality of the wave model results. Wind forcing from a 10-km grid produced higher skills for waves than winds from a 30-km grid, largely due to under-prediction of the mean wind speed and wave height with the coarser grid. The 30-km grid did not resolve the mountain gap wind jets, and thus predicted lower wave heights in the central Red Sea during the summer and along the northeast coast in the winter.
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PreprintTidal and meteorological forcing of sediment transport in tributary mudflat channels( 2006-01-31) Ralston, David K. ; Stacey, Mark T.Field observations of flow and sediment transport in a tributary channel through intertidal mudflats indicate that suspended sediment was closely linked to advection and dispersion of a tidal salinity front. During calm weather when tidal forcing was dominant, high concentrations of suspended sediment advected up the mudflat channel in the narrow region between salty water from San Francisco Bay and much fresher runoff from the small local watershed. Salinity and suspended sediment dispersed at similar rates through each tidal inundation, such that during receding ebbs the sediment pulse had spread spatially and maximum concentrations had decreased. Net sediment transport was moderately onshore during the calm weather, as asymmetries in stratification due to tidal straining of the salinity front enhanced deposition, particularly during weaker neap tidal forcing. Sediment transport by tidal forcing was periodically altered by winter storms. During storms, strong winds from the south generated wind waves and temporarily increased suspended sediment concentrations. Increased discharge down the tributary channels due to precipitation had more lasting impact on sediment transport, supplying both buoyancy and fine sediment to the system. Net sediment transport depended on the balance between calm weather tidal forcing and perturbations by episodic storms. Net transport in the tributary channel was generally off-shore during storms and during calm weather spring tides, and on-shore during calm weather neap tides.
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PreprintTemperature and residence time controls on an estuarine harmful algal bloom : modeling hydrodynamics and Alexandrium fundyense in Nauset estuary( 2015-01) Ralston, David K. ; Brosnahan, Michael L. ; Fox, Sophia E. ; Lee, Krista D. ; Anderson, Donald M.A highly resolved, 3-d model of hydrodynamics and Alexandrium fundyense in an estuarine embayment has been developed to investigate the physical and biological controls on a recurrent harmful algal bloom. Nauset estuary on Cape Cod (MA, USA) consists of three salt ponds connected to the ocean through a shallow marsh and network of tidal channels. The model is evaluated using quantitative skill metrics against observations of physical and biological conditions during three spring blooms. The A. fundyense model is based on prior model applications for the nearby Gulf of Maine, but notable modifications were made to be consistent with the Nauset observations. The dominant factors controlling the A. fundyense bloom in Nauset were the water temperature, which regulates organism growth rates, and the efficient retention of cells due to bathymetric constraints, stratification, and cell behavior (diel vertical migration). Spring-neap variability in exchange altered residence times, but for cell retention to be substantially longer than the cell doubling time required both active vertical migration and stratification that inhibits mixing of cells into the surface layer by wind and tidal currents. Unlike in the Gulf of Maine, the model results were relatively insensitive to cyst distributions or germination rates. Instead, in Nauset, high apparent rates of vegetative cell division by retained populations dictated bloom development. Cyst germination occurred earlier in the year than in the Gulf of Maine, suggesting that Nauset cysts have different controls on germination timing. The model results were relatively insensitive to nutrient concentrations, due to eutrophic conditions in the highly impacted estuary or due to limitations in the spatial and temporal resolution of nutrient sampling. Cell loss rates were inferred to be extremely low during the growth phase of the bloom, but increased rapidly during the final phase due to processes that remain uncertain. The validated model allows a quantitative assessment of the factors that contribute to the development of a recurrent harmful algal bloom and provides a framework for assessing similarly impacted coastal systems.
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PreprintEffects of estuarine and fluvial processes on sediment transport over deltaic tidal flats( 2012-01-25) Ralston, David K. ; Geyer, W. Rockwell ; Traykovski, Peter A. ; Nidzieko, Nicholas J.Tidal flats at a river mouth feature estuarine and fluvial processes that distinguish them from tidal flats without river discharge. We combine field observations and a numerical model to investigate hydrodynamics and sediment transport on deltaic tidal flats at the mouth of the Skagit River, in Puget Sound, WA during the spring freshet. River discharge over tidal flats supplies a mean volume flux, freshwater buoyancy, and suspended sediment. Despite the shallow water depths, strong horizontal density fronts and stratification develop, resulting in a baroclinic pressure gradient and tidal variability in stratification that favor flood-directed bottom stresses. In addition to these estuarine processes, the river discharge during periods of low tide drains through a network of distributary channels on the exposed tidal flats, with strongly ebb-directed stresses. The net sediment transport depends on the balance between estuarine and fluvial processes, and is modulated on a spring-neap time scale by the tides of Puget Sound. We find that the baroclinic pressure gradient and periodic stratification enhance trapping of sediment delivered by the river on the tidal flats, particularly during neap tides, and that sediment trapping also depends on settling and scour lags, particularly for finer particles. The primary means of moving sediment off of the tidal flats are the high velocities and stresses in the distributary channels during late stages of ebbs and around low tides, with sediment export predominantly occurring during spring low tides that expose a greater portion of the flats. The 3-d finite volume numerical model was evaluated against observations and had good skill overall, particularly for velocity and salinity. The model performed poorly at simulating the shallow flows around low tides as the flats drained and river discharge was confined to distributary channels, due in part to limitations in grid resolution, seabed sediment and bathymetric data, and the wetting-and-drying scheme. Consequently, the model predicted greater sediment retention on the flats than was observed.