BCO-DMO Publications & Presentations

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https://hdl.handle.net/1912/9303

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Browsing BCO-DMO Publications & Presentations by Author "Rauch, Shannon"
  • Presentation
    Data Management and Reporting: BCO-DMO Data Management Services & Best Practices
    (Woods Hole Oceanographic Institution, 2024-08-20) Rauch, Shannon ; Kinkade, Danie ; Soenen, Karen ; Gerlach, Dana ; Merchant, Lynne M. ; Newman, Sawyer ; York, Amber ; Schloer, Conrad ; Shepherd, Adam
    BCO-DMO curates a database of research-ready data spanning the full range of marine ecosystem related measurements including in-situ and remotely sensed observations, experimental and model results, and synthesis products. We work closely with investigators to publish data and information from research projects in accordance with F.A.I.R. (Findable, Accessible, Interoperable, Reuseable) data principles.
  • Presentation
    Data Science Training Camp at Woods Hole Oceanographic Institution: Syllabus and slide presentations in 2020
    (Woods Hole Oceanographic Institution, 2020-08-21) Beaulieu, Stace E. ; Raymond, Lisa ; Mickle, Audrey ; Futrelle, Joe ; Symmonds, Nick ; Mazzoli, Roberta ; Brey, Rich ; Kinkade, Danie ; Rauch, Shannon
    With data and software increasingly recognized as scholarly research products, and aiming towards open science and reproducibility, it is imperative for today's oceanographers to learn foundational practices and skills for data management and research computing, as well as practices specific to the ocean sciences. This educational package was developed as a data science training camp for graduate students and professionals in the ocean sciences and implemented at the Woods Hole Oceanographic Institution (WHOI) in 2019 and 2020. Here we provide materials for the 2020 camp which was delivered in-person during two afternoons (total of 8 hours), with two modules per afternoon. We aimed for ~40 participants per camp, with disciplines spanning Earth and life sciences and engineering. Disciplines at each table were mixed on the first afternoon but similar on the second afternoon. Contents of this package include the syllabus and slide presentations for each of the four modules: 1 "Good enough practices in scientific computing," 2 Data management, 3 Software development and research computing, and 4 Best practices in the ocean sciences. The 3rd module is split into two parts. We also include a poster presented at the 2020 Ocean Science Meeting, which has some results from pre- and post-surveys. Funding: The camp was funded by WHOI Academic Programs Office through a Doherty Chair in Education Award, with additional support from WHOI Ocean Informatics Working Group, WHOI Information Services, MBLWHOI Library, the NSF-funded Biological and Chemical Oceanography Data Management Office (BCO-DMO), and an NSF-funded XSEDE Jetstream Education Allocation TG-OCE190011. We also utilized resources from the NSF-funded Pangeo project.
  • Presentation
    Fitting square pegs into a round hole. Curating heterogeneous oceanographic data at BCO-DMO
    (Woods Hole Oceanographic Institution, 2024-02-22) Soenen, Karen ; Kinkade, Danie ; Shepherd, Adam ; Saito, Mak A. ; Gerlach, Dana ; Merchant, Lynne M. ; Newman, Sawyer ; Rauch, Shannon ; York, Amber D.
    BCO-DMO is a domain-specific repository containing 18 years of curated, heterogeneous oceanographic data. Data managers are at the core of the repository, applying the F.A.I.R. principles to every dataset coming in. This talk steers the audience through such a curated dataset, covering the advancements and challenges that comes with domain curation.