High resolution time series reveals cohesive but short-lived communities in coastal plankton

View/ Open
Date
2018-01-18Author
Martin Platero, Antonio Manuel
Concept link
Cleary, Brian
Concept link
Kauffman, Kathryn
Concept link
Preheim, Sarah P.
Concept link
McGillicuddy, Dennis J.
Concept link
Alm, Eric J.
Concept link
Polz, Martin F.
Concept link
Metadata
Show full item recordCitable URI
https://hdl.handle.net/1912/9510As published
https://doi.org/10.1038/s41467-017-02571-4DOI
10.1038/s41467-017-02571-4Keyword
Marine biology; Microbial ecologyAbstract
Because microbial plankton in the ocean comprise diverse bacteria, algae, and protists that are subject to environmental forcing on multiple spatial and temporal scales, a fundamental open question is to what extent these organisms form ecologically cohesive communities. Here we show that although all taxa undergo large, near daily fluctuations in abundance, microbial plankton are organized into clearly defined communities whose turnover is rapid and sharp. We analyze a time series of 93 consecutive days of coastal plankton using a technique that allows inference of communities as modular units of interacting taxa by determining positive and negative correlations at different temporal frequencies. This approach shows both coordinated population expansions that demarcate community boundaries and high frequency of positive and negative associations among populations within communities. Our analysis thus highlights that the environmental variability of the coastal ocean is mirrored in sharp transitions of defined but ephemeral communities of organisms.
Description
© The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nature Communications 9 (2018): 266, doi:10.1038/s41467-017-02571-4.
Collections
Suggested Citation
Nature Communications 9 (2018): 266The following license files are associated with this item:
Related items
Showing items related by title, author, creator and subject.
-
The ocean sampling day consortium
Kopf, Anna; Bicak, Mesude; Kottmann, Renzo; Schnetzer, Julia; Kostadinov, Ivaylo; Lehmann, Katja; Fernandez-Guerra, Antonio; Jeanthon, Christian; Rahav, Eyal; Ullrich, Matthias S.; Wichels, Antje; Gerdts, Gunnar; Polymenakou, Paraskevi; Kotoulas, Georgios; Siam, Rania; Abdallah, Rehab Z.; Sonnenschein, Eva C.; Cariou, Thierry; O’Gara, Fergal; Jackson, Stephen; Orlic, Sandi; Steinke, Michael; Busch, Julia; Duarte, Bernardo; Caçador, Isabel; Canning-Clode, Joao; Bobrova, Oleksandra; Marteinsson, Viggo; Reynisson, Eyjolfur; Loureiro, Clara Magalhaes; Luna, Gian Marco; Quero, Grazia Marina; Loscher, Carolin R.; Kremp, Anke; DeLorenzo, Marie E.; Øvreås, Lise; Tolman, Jennifer; LaRoche, Julie; Penna, Antonella; Frischer, Marc; Davis, Timothy; Katherine, Barker; Meyer, Christopher P.; Ramos, Sandra; Magalhaes, Catarina; Jude-Lemeilleur, Florence; Aguirre-Macedo, Ma Leopoldina; Wang, Shiao; Poulton, Nicole; Jones, Scott; Collin, Rachel; Fuhrman, Jed A.; Conan, Pascal; Alonso, Cecilia; Stambler, Noga; Goodwin, Kelly; Yakimov, Michail M.; Baltar, Federico; Bodrossy, Levente; Van De Kamp, Jodie; Frampton, Dion M. F.; Ostrowski, Martin; Van Ruth, Paul; Malthouse, Paul; Claus, Simon; Deneudt, Klaas; Mortelmans, Jonas; Pitois, Sophie; Wallom, David; Salter, Ian; Costa, Rodrigo; Schroeder, Declan C.; Kandil, Mahrous M.; Amaral, Valentina; Biancalana, Florencia; Santana, Rafael; Pedrotti, Maria Luiza; Yoshida, Takashi; Ogata, Hiroyuki; Ingleton, Tim; Munnik, Kate; Rodriguez-Ezpeleta, Naiara; Berteaux-Lecellier, Veronique; Wecker, Patricia; Cancio, Ibon; Vaulot, Daniel; Bienhold, Christina; Ghazal, Hassan; Chaouni, Bouchra; Essayeh, Soumya; Ettamimi, Sara; Zaid, El Houcine; Boukhatem, Noureddine; Bouali, Abderrahim; Chahboune, Rajaa; Barrijal, Said; Timinouni, Mohammed; El Otmani, Fatima; Bennani, Mohamed; Mea, Marianna; Todorova, Nadezhda; Karamfilov, Ventzislav; ten Hoopen, Petra; Cochrane, Guy R.; L’Haridon, Stephane; Bizsel, Kemal Can; Vezzi, Alessandro; Lauro, Federico M.; Martin, Patrick; Jensen, Rachelle M.; Hinks, Jamie; Gebbels, Susan; Rosselli, Riccardo; De Pascale, Fabio; Schiavon, Riccardo; dos Santos, Antonina; Villar, Emilie; Pesant, Stephane; Cataletto, Bruno; Malfatti, Francesca; Edirisinghe, Ranjith; Herrera Silveira, Jorge A.; Barbier, Michele; Turk, Valentina; Tinta, Tinkara; Fuller, Wayne J.; Salihoglu, Ilkay; Serakinci, Nedime; Ergoren, Mahmut Cerkez; Bresnan, Eileen; Iriberri, Juan; Fronth Nyhus, Paul Anders; Bente, Edvardsen; Karlsen, Hans Erik; Golyshin, Peter N.; Gasol, Josep M.; Moncheva, Snejana; Dzhembekova, Nina; Johnson, Zackary; Sinigalliano, Christopher D.; Gidley, Maribeth Louise; Zingone, Adriana; Danovaro, Roberto; Tsiamis, Georgios; Clark, Melody S.; Costa, Ana Cristina; El Bour, Monia; Martins, Ana M.; Collins, R. Eric; Ducluzeau, Anne-Lise; Martinez, Jonathan; Costello, Mark J.; Amaral-Zettler, Linda A.; Gilbert, Jack A.; Davies, Neil; Field, Dawn; Glockner, Frank Oliver (BioMed Central, 2015-06-19)Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. ... -
SEASTAR: A mission to study ocean submesoscale dynamics and small-scale atmosphere-ocean processes in coastal, shelf and polar seas
Gommenginger, Christine; Chapron, Bertrand; Hogg, Andy; Buckingham, Christian; Fox-Kemper, Baylor; Eriksson, Leif; Soulat, Francois; Ubelmann, Clement; Ocampo-Torres, Francisco; Nardelli, Bruno Buongiorno; Griffin, David; Lopez-Dekker, Paco; Knudsen, Per; Andersen, Ole; Stenseng, Lars; Stapleton, Neil; Perrie, Will; Violante-Carvalho, Nelson; Schulz-Stellenfleth, Johannes; Woolf, David K.; Isern-Fontanet, Jordi; Ardhuin, Fabrice; Klein, Patrice; Mouche, Alexis; Pascual, Ananda; Capet, Xavier; Hauser, Daniele; Stoffelen, Ad; Morrow, Rosemary; Aouf, Lotfi; Breivik, Øyvind; Fu, Lee-Lueng; Johannessen, Johnny A.; Aksenov, Yevgeny; Bricheno, Lucy; Hirschi, Joel; Martin, Adrien C. H.; Martin, Adrian P.; Nurser, A. J. George; Polton, Jeff; Wolf, Judith; Johnsen, Harald; Soloviev, Alexander; Jacobs, Gregg A.; Collard, Fabrice; Groom, Steve; Kudryavtsev, Vladimir; Wilkin, John L.; Navarro, Victor; Babanin, Alexander; Martin, Matthew; Siddorn, John; Saulter, Andrew; Rippeth, Tom; Emery, Bill; Maximenko, Nikolai; Romeiser, Roland; Graber, Hans C.; Alvera Azcarate, Aida; Hughes, Chris W.; Vandemark, Douglas; da Silva, Jose; Van Leeuwen, Peter Jan; Naveira Garabato, Alberto C.; Gemmrich, Johannes; Mahadevan, Amala; Marquez, Jose; Munro, Yvonne; Doody, Sam; Burbidge, Geoff (Frontiers Media, 2019-08-13)High-resolution satellite images of ocean color and sea surface temperature reveal an abundance of ocean fronts, vortices and filaments at scales below 10 km but measurements of ocean surface dynamics at these scales are ... -
The GEOTRACES Intermediate Data Product 2017
Schlitzer, Reiner; Anderson, Robert F.; Dodas, Elena Masferrer; Lohan, Maeve C.; Geibert, Walter; Tagliabue, Alessandro; Bowie, Andrew R.; Jeandel, Catherine; Maldonado, Maria T.; Landing, William M.; Cockwell, Donna; Abadie, Cyril; Abouchami, Wafa; Achterberg, Eric P.; Agather, Alison; Aguliar-Islas, Ana; van Aken, Hendrik M.; Andersen, Morten; Archer, Corey; Auro, Maureen E.; Baar, Hein J. W. de; Baars, Oliver; Baker, Alex R.; Bakker, Karel; Basak, Chandranath; Baskaran, Mark; Bates, Nicholas R.; Bauch, Dorothea; van Beek, Pieter; Behrens, Melanie K.; Black, Erin E.; Bluhm, Katrin; Bopp, Laurent; Bouman, Heather; Bowman, Katlin; Bown, Johann; Boyd, Philip; Boye, Marie; Boyle, Edward A.; Branellec, Pierre; Bridgestock, Luke; Brissebrat, Guillaume; Browning, Thomas; Bruland, Kenneth W.; Brumsack, Hans-Jürgen; Brzezinski, Mark A.; Buck, Clifton S.; Buck, Kristen N.; Buesseler, Ken O.; Bull, Abby; Butler, Edward; Cai, Pinghe; Cámara Mor, Patricia; Cardinal, Damien; Carlson, Craig; Carrasco, Gonzalo; Casacuberta, Nuria; Casciotti, Karen L.; Castrillejo, Maxi; Chamizo, Elena; Chance, Rosie; Charette, Matthew A.; Chaves, Joaquin E.; Cheng, Hai; Chever, Fanny; Christl, Marcus; Church, Thomas M.; Closset, Ivia; Colman, Albert S.; Conway, Tim M.; Cossa, Daniel; Croot, Peter L.; Cullen, Jay T.; Cutter, Gregory A.; Daniels, Chris; Dehairs, Frank; Deng, Feifei; Dieu, Huong Thi; Duggan, Brian; Dulaquais, Gabriel; Dumousseaud, Cynthia; Echegoyen-Sanz, Yolanda; Edwards, R. Lawrence; Ellwood, Michael J.; Fahrbach, Eberhard; Fitzsimmons, Jessica N.; Flegal, A. Russell; Fleisher, Martin Q.; van de Flierdt, Tina; Frank, Martin; Friedrich, Jana; Fripiat, Francois; Fröllje, Henning; Galer, Stephen J. G.; Gamo, Toshitaka; Ganeshram, Raja S.; Garcia-Orellana, Jordi; Garcia Solsona, Ester; Gault-Ringold, Melanie; George, Ejin; Gerringa, Loes J. A.; Gilbert, Melissa; Godoy, Jose Marcus; Goldstein, Steven L.; Gonzalez, Santiago; Grissom, Karen; Hammerschmidt, Chad R.; Hartman, Alison; Hassler, Christel; Hathorne, Ed C.; Hatta, Mariko; Hawco, Nicholas J.; Hayes, Christopher T.; Heimbürger, Lars-Eric; Helgoe, Josh; Heller, Maija Iris; Henderson, Gideon M.; Henderson, Paul B.; van Heuven, Steven; Ho, Peng; Horner, Tristan J.; Hsieh, Yu-Te; Huang, Kuo-Fang; Humphreys, Matthew P.; Isshiki, Kenji; Jacquot, Jeremy E.; Janssen, David J.; Jenkins, William J.; John, Seth; Jones, Elizabeth M.; Jones, Janice L.; Kadko, David; Kayser, Rick; Kenna, Timothy C.; Khondoker, Roulin; Kim, Taejin; Kipp, Lauren; Klar, Jessica K.; Klunder, Maarten; Kretschmer, Sven; Kumamoto, Yuichiro; Laan, Patrick; Labatut, Marie; Lacan, Francois; Lam, Phoebe J.; Lambelet, Myriam; Lamborg, Carl H.; le Moigne, Frederique; Le Roy, Emilie; Lechtenfeld, Oliver J.; Lee, Jong-Mi; Lherminier, Pascale; Little, Susan; López-Lora, Mercedes; Lu, Yanbin; Masque, Pere; Mawji, Edward; McClain, Charles R.; Measures, Christopher I.; Mehic, Sanjin; Menzel Barraqueta, Jan-Lukas; Merwe, Pier van der; Middag, Rob; Mieruch, Sebastian; Milne, Angela; Minami, Tomoharu; Moffett, James W.; Moncoiffe, Gwenaelle; Moore, Willard S.; Morris, Paul J.; Morton, Peter L.; Nakaguchi, Yuzuru; Nakayama, Noriko; Niedermiller, John; Nishioka, Jun; Nishiuchi, Akira; Noble, Abigail E.; Obata, Hajime; Ober, Sven; Ohnemus, Daniel C.; van Ooijen, Jan; O'Sullivan, Jeanette; Owens, Stephanie A.; Pahnke, Katharina; Paul, Maxence; Pavia, Frank; Pena, Leopoldo D.; Peters, Brian; Planchon, Frederic; Planquette, Helene; Pradoux, Catherine; Puigcorbé, Viena; Quay, Paul D.; Queroue, Fabien; Radic, Amandine; Rauschenberg, Sara; Rehkämper, Mark; Rember, Robert; Remenyi, Tomas A.; Resing, Joseph A.; Rickli, Joerg; Rigaud, Sylvain; Rijkenberg, Micha J. A.; Rintoul, Stephen R.; Robinson, Laura F.; Roca-Martí, Montserrat; Rodellas, Valenti; Roeske, Tobias; Rolison, John M.; Rosenberg, Mark; Roshan, Saeed; Rutgers van der Loeff, Michiel M.; Ryabenko, Evgenia; Saito, Mak A.; Salt, Lesley; Sanial, Virginie; Sarthou, Geraldine; Schallenberg, Christina; Schauer, Ursula; Scher, Howie; Schlosser, Christian; Schnetger, Bernhard; Scott, Peter M.; Sedwick, Peter N.; Semiletov, Igor P.; Shelley, Rachel U.; Sherrell, Robert M.; Shiller, Alan M.; Sigman, Daniel M.; Singh, Sunil Kumar; Slagter, Hans; Slater, Emma; Smethie, William M.; Snaith, Helen; Sohrin, Yoshiki; Sohst, Bettina M.; Sonke, Jeroen E.; Speich, Sabrina; Steinfeldt, Reiner; Stewart, Gillian; Stichel, Torben; Stirling, Claudine H.; Stutsman, Johnny; Swarr, Gretchen J.; Swift, James H.; Thomas, Alexander; Thorne, Kay; Till, Claire P.; Till, Ralph; Townsend, Ashley T.; Townsend, Emily; Tuerena, Robyn; Twining, Benjamin S.; Vance, Derek; Velazquez, Sue; Venchiarutti, Celia; Villa-Alfageme, Maria; Vivancos, Sebastian M.; Voelker, Antje H. L.; Wake, Bronwyn; Warner, Mark J.; Watson, Ros; van Weerlee, Evaline; Weigand, M. Alexandra; Weinstein, Yishai; Weiss, Dominik; Wisotzki, Andreas; Woodward, E. Malcolm S.; Wu, Jingfeng; Wu, Yingzhe; Wuttig, Kathrin; Wyatt, Neil; Xiang, Yang; Xie, Ruifang C.; Xue, Zichen; Yoshikawa, Hisayuki; Zhang, Jing; Zhang, Pu; Zhao, Ye; Zheng, Linjie; Zheng, Xin-Yuan; Zieringer, Moritz; Zimmer, Louise A.; Ziveri, Patrizia; Zunino, Patricia; Zurbrick, Cheryl (Elsevier, 2018-06-01)The GEOTRACES Intermediate Data Product 2017 (IDP2017) is the second publicly available data product of the international GEOTRACES programme, and contains data measured and quality controlled before the end of 2016. The ...