Population dynamics and diversity of Synechococcus on the New England Shelf
Hunter-Cevera, Kristen R.
MetadataShow full item record
LocationMartha's Vineyard, Masssacusetts
Synechococcus is a ubiquitous marine primary producer. Our understanding of the factors that determine its abundance has been limited by available observational tools, which have not been able to resolve population dynamics at timescales that match response times of cells (hours-days). Development of an automated flow cytometer (FlowCytobot) has enabled hourly observation of Synechococcus at the Martha’s Vineyard Coastal Observatory (MVCO) since 2003. In order to ascribe changes in cell abundances to either growth or loss processes, information on division rate is needed. I refined a matrix population model that relates diel changes in the distribution of cell volume to division rate and demonstrated that it provides accurate estimates of daily division rate for both cultured and natural populations. Application of the model to the 11-year MVCO time series reveals that division rate is temperature limited during winter and spring, but light limited during fall. Inferred loss rates closely follow division rate in magnitude over the entire seasonal cycle, suggesting that losses are mainly generated by biological processes. While Synechococcus cell abundance, division rate, and loss rate demonstrate striking seasonal patterns, there are also significant shorter timescale variations and important multi-year trends that may be linked to climate. Interpretation of population dynamic patterns is complicated by the diversity found within marine Synechococcus, which is partitioned into 20 genetically distinct clades. Each clade may represent an ecotype, with a distinct ecological niche. To understand how diversity may affect population dynamics, I assessed the diversity at MVCO over annual cycles with culture-independent and dependent approaches. The population at MVCO is diverse, but dominated by clade I representatives throughout the year. Other clades were only found during summer and fall. High through-put sequencing of a diversity marker allowed a more quantitative investigation into these patterns. Five main Synechococcus oligotypes that comprise the population showed seasonal abundance patterns: peaking either during the spring bloom or during late summer and fall. This pattern strongly suggests that features of seasonal abundance are affected by the underlying diversity structure. Synechococcus abundance patterns result from a complex interplay among seasonal environmental changes, diversity, and biological losses.
Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution September 2014
Suggested CitationThesis: Hunter-Cevera, Kristen R., "Population dynamics and diversity of Synechococcus on the New England Shelf", 2014-09, DOI:10.1575/1912/6910, https://hdl.handle.net/1912/6910
Showing items related by title, author, creator and subject.
Barth, John A. (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 1987-10)A two-layer shallow water equation model is used to investigate the linear stability of a coastal upwelling front. The model features a surface front near a coastal boundary and bottom topography which is an arbitrary ...
Alpert, Alice (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 2016-09)Paleoclimate archives place the short instrumental record of climate variability in a longer temporal context and allow better understanding of the rate, nature and extent by which anthropogenic warming will i ...
Christeson, Gail L. (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 1994-02)This thesis is concerned with understanding how oceanic crust is emplaced at mid-ocean ridges. The emphasis is upon fast-spreading ridges, and the use of seismic techniques to image the uppermost several hundred meters ...