Microbial diversity and potential pathogens in onamental fish aquarium water
Table S1. Diagnostic PCR primers used to determine presence of potential pathogenic genera, and to clone Legionella , Vibrio and Aeromonas. (86.92Kb)
Table S1. Diagnostic PCR primers used to determine presence of potential pathogenic genera, and to clone Legionella , Vibrio and Aeromonas. (16.12Kb)
Table S2. Sequence of universal bacterial primer cocktail used to amplify V3–V5 16S rRNA gene hypervariable region. (64.47Kb)
Table S2. Sequence of universal bacterial primer cocktail used to amplify V3–V5 16S rRNA gene hypervariable region. (36.57Kb)
Smith, Katherine F.
Schmidt, Victor T.
Rosen, Gail E.
Amaral-Zettler, Linda A.
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Ornamental fishes are among the most popular and fastest growing categories of pets in the United States (U.S.). The global scope and scale of the ornamental fish trade and growing popularity of pet fish in the U.S. are strong indicators of the myriad economic and social benefits the pet industry provides. Relatively little is known about the microbial communities associated with these ornamental fishes or the aquarium water in which they are transported and housed. Using conventional molecular approaches and next generation high-throughput amplicon sequencing of 16S ribosomal RNA gene hypervariable regions, we characterized the bacterial community of aquarium water containing common goldfish (Carassius auratus) and Chinese algae eaters (Gyrinocheilus aymonieri) purchased from seven pet/aquarium shops in Rhode Island and identified the presence of potential pathogens. Our survey identified a total of 30 phyla, the most common being Proteobacteria (52%), Bacteroidetes (18%) and Planctomycetes (6%), with the top four phyla representing >80% of all sequences. Sequences from our water samples were most closely related to eleven bacterial species that have the potential to cause disease in fishes, humans and other species: Coxiella burnetii, Flavobacterium columnare, Legionella birminghamensis, L. pneumophila, Vibrio cholerae, V. mimicus. V. vulnificus, Aeromonas schubertii, A. veronii, A. hydrophila and Plesiomonas shigelloides. Our results, combined with evidence from the literature, suggest aquarium tank water harboring ornamental fish are an understudied source for novel microbial communities and pathogens that pose potential risks to the pet industry, fishes in trade, humans and other species.
© The Author(s), 2012. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 7 (2012): e39971, doi:10.1371/journal.pone.0039971.
Suggested CitationArticle: Smith, Katherine F., Schmidt, Victor T., Rosen, Gail E., Amaral-Zettler, Linda A., "Microbial diversity and potential pathogens in onamental fish aquarium water", PLoS ONE 7 (2012): e39971, DOI:10.1371/journal.pone.0039971, https://hdl.handle.net/1912/5463
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