Unique prokaryotic consortia in geochemically distinct sediments from Red Sea Atlantis II and Discovery Deep brine pools

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2012-08-20Author
Siam, Rania
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Mustafa, Ghada A.
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Sharaf, Hazem
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Moustafa, Ahmed
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Ramadan, Adham R.
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Antunes, Andre
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Bajic, Vladimir B.
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Stingl, Uli
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Marsis, Nardine G. R.
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Coolen, Marco J. L.
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Sogin, Mitchell L.
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Ferreira, Ari J. S.
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El Dorry, Hamza
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https://hdl.handle.net/1912/5403As published
https://doi.org/10.1371/journal.pone.0042872DOI
10.1371/journal.pone.0042872Abstract
The seafloor is a unique environment, which allows insights into how geochemical processes affect the diversity of
biological life. Among its diverse ecosystems are deep-sea brine pools - water bodies characterized by a unique
combination of extreme conditions. The ‘polyextremophiles’ that constitute the microbial assemblage of these deep hot
brines have not been comprehensively studied. We report a comparative taxonomic analysis of the prokaryotic
communities of the sediments directly below the Red Sea brine pools, namely, Atlantis II, Discovery, Chain Deep, and an
adjacent brine-influenced site. Analyses of sediment samples and high-throughput pyrosequencing of PCR-amplified
environmental 16S ribosomal RNA genes (16S rDNA) revealed that one sulfur (S)-rich Atlantis II and one nitrogen (N)-rich
Discovery Deep section contained distinct microbial populations that differed from those found in the other sediment
samples examined. Proteobacteria, Actinobacteria, Cyanobacteria, Deferribacteres, and Euryarchaeota were the most
abundant bacterial and archaeal phyla in both the S- and N-rich sections. Relative abundance-based hierarchical clustering
of the 16S rDNA pyrotags assigned to major taxonomic groups allowed us to categorize the archaeal and bacterial
communities into three major and distinct groups; group I was unique to the S-rich Atlantis II section (ATII-1), group II was
characteristic for the N-rich Discovery sample (DD-1), and group III reflected the composition of the remaining sediments.
Many of the groups detected in the S-rich Atlantis II section are likely to play a dominant role in the cycling of methane and
sulfur due to their phylogenetic affiliations with bacteria and archaea involved in anaerobic methane oxidation and sulfate
reduction.
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© The Author(s), 2012. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 7 (2012): e42872, doi:10.1371/journal.pone.0042872.
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PLoS ONE 7 (2012): e42872The following license files are associated with this item: