Microbial eukaryotic focused metatranscriptome data from seawater collected in coastal California in May of 2015
Citable URI
https://hdl.handle.net/1912/25760As published
http://lod.bco-dmo.org/id/dataset/745518https://doi.org/10.26008/1912/bco-dmo.745518.2
Date Created
2018-10-15Location
San Pedro Channel off the coast of Los Angeleswestlimit: -118.4; southlimit: 33.55; eastlimit: -118.4; northlimit: 33.55
DOI
10.26008/1912/bco-dmo.745518.2Keyword
Microbial ecology; Microbial eukaryotes; Metatranscriptomics; Protistan trophic strategies; Microbial eukaryotic metatranscriptomicsAbstract
Seawater was collected via Niskin bottles mounted with a CTD from the San Pedro Ocean Time-series (SPOT) station off the coast of Southern California near the surface (5 m), 150 and 890 m, in late May 2015. Raw sequence data was generated as part of a metatranscriptome study targeting the protistan community. Raw sequences are available at the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database (SRA Study ID: SRP110974, BioProject: PRJNA391503). Sequences for BioProject PRJNA608423 will be available at NCBI on Jan 1st, 2021.
These data were published in Hu et al. (2018).
For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/745518
Description
Dataset: Microbial eukaryotic focused metatranscriptome data
Suggested Citation
Dataset: Caron, David, Hu, Sarah K, "Microbial eukaryotic focused metatranscriptome data from seawater collected in coastal California in May of 2015", 2020-05-11, DOI:10.26008/1912/bco-dmo.745518.2, https://hdl.handle.net/1912/25760
Except where otherwise noted, this item's license is described as Creative Commons Attribution 4.0
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