Net tow metaproteoome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes in units of normalized peptide spectral counts from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018
Citable URI
https://hdl.handle.net/1912/25730As published
http://lod.bco-dmo.org/id/dataset/787168https://doi.org/10.26008/1912/bco-dmo.787168.1
Date Created
2020-04-30Location
Tropical Atlanticwestlimit: -158; southlimit: 0.17; eastlimit: -21.59; northlimit: 23.22
DOI
10.26008/1912/bco-dmo.787168.1Abstract
Net tow metaproteoome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes, analyzed by 2D LC-MS/MS in units of normalized peptide spectral counts. Samples were collected in North Atlantic surface waters, at station BATS (Bermuda Atlantic Time-series Study), and station ALOHA (A Long-Term Oligotrophic Habitat Assessment) between 2000 and 2018.
For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/787168
Description
Dataset: Trichodesmium field metaproteomes - peptide spectral counts
Suggested Citation
Dataset: Saito, Mak A., "Net tow metaproteoome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes in units of normalized peptide spectral counts from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018", 2020-05-01, DOI:10.26008/1912/bco-dmo.787168.1, https://hdl.handle.net/1912/25730Related items
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Net tow metaproteome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes in units of normalized protein spectral counts from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018
Saito, Mak A. (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2020-05-01)Net tow metaproteome of Trichodesmium species mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes, analyzed by 2D LC-MS/MS in units of normalized protein spectral counts. Samples were collected in North ... -
FASTA file of sequences in Trichodesmium field metaproteomes mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018
Saito, Mak A. (Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu, 2020-04-30)FASTA file of sequences in Trichodesmium field metaproteomes analyzed by 2D LC-MS/MS mapped to a Trichodesmium metagenome (IMG ID 2821474806) plus cyanoGEBA species genomes (Shih et al, 2013). Samples were collected in ... -
Microbial interactions associated with biofilms attached to Trichodesmium spp. and detrital particles in the ocean
Hmelo, Laura R. (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 2010-06)Quorum sensing (QS) via acylated homoserine lactones (AHLs) was discovered in the ocean, yet little is known about its role in the ocean beyond its involvement in certain symbiotic interactions. The objectives of this ...