FASTA file of sequences in Trichodesmium field metaproteomes mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018
Citable URI
https://hdl.handle.net/1912/25722As published
http://lod.bco-dmo.org/id/dataset/787181https://doi.org/10.26008/1912/bco-dmo.787181.1
Date Created
2020-01-14Location
Tropical Atlanticwestlimit: -158; southlimit: 0.17; eastlimit: -21.59; northlimit: 23.22
DOI
10.26008/1912/bco-dmo.787181.1Keyword
Trichodesmium; metaproteomicsAbstract
FASTA file of sequences in Trichodesmium field metaproteomes analyzed by 2D LC-MS/MS mapped to a Trichodesmium metagenome (IMG ID 2821474806) plus cyanoGEBA species genomes (Shih et al, 2013). Samples were collected in North Atlantic surface waters, at station BATS (Bermuda Atlantic Time-series Study), and station ALOHA (A Long-Term Oligotrophic Habitat Assessment) between 2000 and 2018.
Related datasets:
Trichodesmium field metaproteomes - peptide spectral counts: https://www.bco-dmo.org/dataset/787168
Trichodesmium field metaproteomes - protein spectral counts: https://www.bco-dmo.org/dataset/787147
Trichodesmium sample provenance: https://www.bco-dmo.org/dataset/787093 - Sample provenance file, which includes sample locations, filter sizes
For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/787181
Description
Dataset: Trichodesmium field metaproteomes - sequence fasta
Suggested Citation
Dataset: Saito, Mak A., "FASTA file of sequences in Trichodesmium field metaproteomes mapped to a Trichodesmium metagenome plus cyanoGEBA species genomes from samples collected in the Atlantic and Pacific Ocean between 2000 and 2018", 2020-04-30, DOI:10.26008/1912/bco-dmo.787181.1, https://hdl.handle.net/1912/25722
Except where otherwise noted, this item's license is described as Creative Commons Attribution 4.0
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