Molecular phylogenetics of the Metazoan clade Lophotrochozoa
Passamaneck, Yale J.
MetadataShow full item record
KeywordMollusks; Phylogeny; Evolution; Genome mapping; Homeobox genes; Recombinant DNA; Cladistic analysis
DNA sequencing and phylogenetic analyses were conducted to investigate evolutionary relationships between taxa within the metazoan clade Lophotrochozoa. Chapter 1 presents an introduction to phylogenetics of the Metazoa and the clade Lophotrochozoa. Chapter 2 analyzes higher level relationships between the major groups within the phylum Mollusca using sequences of the nuclear ribosomal large-subunit RNA gene (LSD rDNA). Results presented provide the first molecular evidence for a close relationship between the Scaphopoda and Cephalopoda. Phylogenetic trees with this topology were found to have likelihood scores significantly better than those for phylogenies constrained to fit the Diasoma hypothesis grouping Scaphopoda and Bivalvia as sister taxa. Chapter 3 utilizes LSU rDNA sequences to analyze relationships between diverse phyla within the clade Lophotrochozoa. LSU rDNA sequences were found to provide greater resolution than has been provided by previous analyses of the nuclear small-subunit ribosomal RNA gene (SSU rDNA). Analysis ofLSU rDNA sequences recovered the monophyly of several phyla, such as Mollusca and Anelida, whose members are found to be paraphyletic using SSU rDNA sequences alone. Results also suggest that the clade Platyzoa, including rotifers and platyhelminthes, may have arisen within the Lophotrochozoa, rather than as a sister group to lophotrochozoans. Chapter 4 investigates the Hox gene complement of the bryozoan Bugula turrita. Six Hox genes were recovered, including an ortholog of the posterior class gene Post2, which is a synapomorphy for the Lophotrochozoa. The identification of a Post2 ortholog provides evidence of a close relationship between the Bryozoa and other lophotrochozoan phyla.
Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution September 2003
Showing items related by title, author, creator and subject.
Waldbauer, Jacob R. (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 2010-02)Biological activity has shaped the surface of the earth in numerous ways, but life’s most pervasive and persistent global impact has been the secular oxidation of the surface environment. Through primary production – the ...
Temporal variability and vertical structure in larval abundance : the potential roles of biological and physical processes Garland, Elizabeth D. (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 2000-02)Recruitment variability in benthic invertebrate populations results from variability in planktonic larval supply and from processes occurring during and after larval settlement onto the seafloor. The focus of this thesis ...
Physiological and behavioral diagnostics of nitrogen limitation for the toxic dinoflagellate Alexandrium fundyense Poulton, Nicole J. (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 2000-09)One challenge in phytoplankton ecology is to measure species-specific physiological responses to changes in environmental conditions. Of particular importance in this regard are harmful algal bloom (RAB) species such as ...