Sample and genetic accession information for RNA-seq data from whole Atlantic silverside (Menidia menidia) larvae from two populations and their F1 hybrids reared under different temperatures in 2017

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Date Created
2021-06-29
Location
Eastern coastline of North America
westlimit: -81.43; southlimit: 31.02; eastlimit: -73; northlimit: 40.75
DOI
10.26008/1912/bco-dmo.854887.1
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Keywords
Local adaptation
Atlantic silversides
gene expression/transcriptomics
phenotypic plasticity
Abstract
Sample and genetic accession information for RNA-seq data from whole Atlantic silverside (Menidia menidia) larvae from two populations and their F1 hybrids. Larvae were reared under two different temperatures to study temperature-dependent gene regulatory divergence between locally adapted Atlantic silverside populations in 2017. The data are deposited in the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) with accession numbers SRR13523227- SRR13523268 associated with BioProject PRJNA694674 and BioSamples SAMN17531688 - SAMN17531729. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/854887
Description
Dataset: Atlantic silverside RNA-seq reads
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Citation
Therkildsen, N. O., & Baumann, H. (2024). Sample and genetic accession information for RNA-seq data from whole Atlantic silverside (Menidia menidia) larvae from two populations and their F1 hybrids reared under different temperatures in 2017 (Version 1) [Data set]. Biological and Chemical Oceanography Data Management Office (BCO-DMO). https://doi.org/10.26008/1912/BCO-DMO.854887.1
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