Desmophyllum dianthus (Esper, 1794) in the scleractinian phylogeny and its intraspecific diversity

dc.contributor.author Addamo, Anna M.
dc.contributor.author Reimer, James D.
dc.contributor.author Taviani, Marco
dc.contributor.author Freiwald, Andre
dc.contributor.author Machordom, Annie
dc.date.accessioned 2013-01-23T16:27:30Z
dc.date.available 2013-01-23T16:27:30Z
dc.date.issued 2012-11-28
dc.description © The Author(s), 2012. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 7 (2012): e50215, doi:10.1371/journal.pone.0050215. en_US
dc.description.abstract The cosmopolitan solitary deep-water scleractinian coral Desmophyllum dianthus (Esper, 1794) was selected as a representative model species of the polyphyletic Caryophylliidae family to (1) examine phylogenetic relationships with respect to the principal Scleractinia taxa, (2) check population structure, (3) test the widespread connectivity hypothesis and (4) assess the utility of different nuclear and mitochondrial markers currently in use. To carry out these goals, DNA sequence data from nuclear (ITS and 28S) and mitochondrial (16S and COI) markers were analyzed for several coral species and for Mediterranean populations of D. dianthus. Three phylogenetic methodologies (ML, MP and BI), based on data from the four molecular markers, all supported D. dianthus as clearly belonging to the “robust” clade, in which the species Lophelia pertusa and D. dianthus not only grouped together, but also shared haplotypes for some DNA markers. Molecular results also showed shared haplotypes among D. dianthus populations distributed in regions separated by several thousands of kilometers and by clear geographic barriers. These results could reflect limited molecular and morphological taxonomic resolution rather than real widespread connectivity. Additional studies are needed in order to find molecular markers and morphological features able to disentangle the complex phylogenetic relationship in the Order Scleractinia and to differentiate isolated populations, thus avoiding the homoplasy found in some morphological characters that are still considered in the literature. en_US
dc.description.sponsorship This study was funded by CTM2009-00496 and CGL2011-23306 projects of the “Ministerio de Ciencia e Innovación” (Spain). Research at sea was partly supported by the European Commission F. P.VI Project HERMES Contract No. GOCE-CT-2005-511234-1) and the EU F.P. VII Project HERMIONE(contract number no. 226354). en_US
dc.format.mimetype application/pdf
dc.format.mimetype application/vnd.ms-excel
dc.identifier.citation PLoS One 7 (2012): e50215 en_US
dc.identifier.doi 10.1371/journal.pone.0050215
dc.identifier.uri https://hdl.handle.net/1912/5731
dc.language.iso en_US en_US
dc.publisher Public Library of Science en_US
dc.relation.uri https://doi.org/10.1371/journal.pone.0050215
dc.rights Attribution 3.0 Unported *
dc.rights.uri http://creativecommons.org/licenses/by/3.0/ *
dc.title Desmophyllum dianthus (Esper, 1794) in the scleractinian phylogeny and its intraspecific diversity en_US
dc.type Article en_US
dspace.entity.type Publication
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relation.isAuthorOfPublication.latestForDiscovery 09372e9d-2112-4378-bcdc-7008a806ccaa
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Figure S1. Water masses and circulation in the central Mediterranean Sea, modified from Reithdorf, 2008.
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Figure S2. Mitochondrial 16S rRNA phylogenetic tree.
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Figure S3. Network of mitochondrial 16S rDNA sequences.
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Table S1. Depth, method, and geographic coordinates of sampling locations.
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