Metadata for targeted genotyping of green crabs collected in the northeast Pacific from Aug 2016 to Oct 2022

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Date
2025-02-10
Authors
Tepolt, Carolyn
Grason, Emily
McDonald, Patrick
Akmajian, Adrianne
Yamada, Sylvia Behrens
Schooler, Shon
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Date Created
2025-01-27
Location
North American west coast: 36 N to 51 N. Emphasis on the Salish Sea
westlimit: -124.323273; southlimit: 43.347281; eastlimit: -122.422437; northlimit: 49.606306
DOI
10.26008/1912/bco-dmo.949610.1
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Keywords
Carcinus maenas
population genetics
marine invasion
Abstract
This project explores genetic changes in the invasive European green crab (Carcinus maenas) in the northeast Pacific, using targeted genotyping of SNPs identified in prior high-resolution population genomics in the region. It tracks the early stages of green crab invasion into a new environment, particularly through repeated sampling of multiple size-classes of crabs from the same sites over multiple years. Samples span time and space across the species range in the northeast Pacific, with a focus on the coast of Washington and Oregon. This dataset includes individual collection and accession metadata for 1,662 crabs, for which raw demultiplexed reads are archived at GenBank's SRA under BioProject PRJNA1177418. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/949610
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Dataset: Metadata for targeted genotyping of green crabs in the northeast Pacific
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