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  • Beliakova, Natalia Y. (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 1999-02)
    This thesis studies the problems of generation and maintenance of recirculations by Gulf Stream instabilities. Observations show that the horizontal structure of the jet and its recirculations suffer significant changes ...
  • Scotti, Alberto; Beardsley, Robert C.; Butman, Bradford (American Geophysical Union, 2007-10-02)
    During the summer, nonlinear internal waves (NLIWs) are commonly observed propagating in Massachusetts Bay. The topography of the area is unique in the sense that the generation area (over Stellwagen Bank) is only 25 km ...
  • Hendry, Ross MacRae (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 1975-04)
    This thesis reports on an investigation into the structure, energetics and propagation of tidal frequency internal waves. Data from Site D, near the New England continental slope, Muir Seamount northeast of Bermuda, and ...
  • Arbic, Brian K. (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 2000-08)
    The plausibility of local baroclinic instability as a generation mechanism for midocean mesoscale eddies is examined with a two-layer, quasi-geostrophic (QG) model forced by an imposed, horizontally homogeneous, vertically ...
  • Jackson, Christopher R.; da Silva, Jose C. B.; Jeans, Gus (The Oceanography Society, 2012-06)
    Nonlinear internal waves are found in many parts of the world ocean. Their widespread distribution is a result of their origin in the barotropic tide and in the variety of ways they can be generated, including by lee waves, ...
  • Tivey, Margaret K. (Oceanography Society, 2007-03)
    In the nearly 30 years since the discovery of hydrothermal venting along open-ocean spreading centers, much has been learned about the generation of vent fluids and associated deposits. The hot, reducing, metal-rich, ...
  • Dupuis, Christian; Aubry, Marie-Pierre; King, Christopher; Knox, Robert W. O'B.; Berggren, William A.; Youssef, Mostafa; Galal, Wael Fathi; Roche, Marc (2011-02-16)
    The desertic Theban hills between the edge of the alluvial plain of the Nile and the prominent cliffs at the eastern edge of the Theban Plateau consist of imbricated tilted blocks organized in parallel groups representing ...
  • Bockheim, James G.; Kurz, Mark D.; Soule, Samuel A.; Burke, Andrea (2009-05)
    Nonsorted polygons with sand-filled wedges were investigated in lower and central Beacon Valley, Antarctica (77.82ºS, 160.67ºE) using field observations coupled with a 2-m resolution Digital Elevation Model and a ...
  • Ferguson, Edwin Louis (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 1985-05)
    The cell lineages of the nematode Caenorhabditis elegana are essentially invariant among individuals. We have begun an attempt to understand the genetic specification of one particular cell lineage, that of the hermaphrodite ...
  • Vigliola, Laurent; Doherty, Peter J.; Meekan, Mark G.; Drown, Devin M.; Jones, M. Elizabeth; Barber, Paul H. (Ecological Society of America, 2007-05)
    Longitudinal sampling of four cohorts of Neopomacentrus filamentosus, a common tropical damselfish from Dampier Archipelago, Western Australia, revealed the evolution of size structure after settlement. Light traps collected ...
  • Brand, Larry E. (Massachusetts Institute of Technology and Woods Hole Oceanographic Institution, 1980-01)
    The acclimated asexual reproduction rates of many clones of Emiliania huxleyi (82), Gephrocapsa oceanica (19), Cyclococcolithina leptopora (31), Prorocentrum micans (28), Dissodinium lunula (22), Thoracosphaera heimi ...
  • Scott, Kathleen M.; Sievert, Stefan M.; Abril, Fereniki N.; Ball, Lois A.; Barrett, Chantell J.; Blake, Rodrigo A.; Boller, Amanda J.; Chain, Patrick S. G.; Clark, Justine A.; Davis, Carisa R.; Detter, Chris; Do, Kimberly F.; Dobrinski, Kimberly P.; Faza, Brandon I.; Fitzpatrick, Kelly A.; Freyermuth, Sharyn K.; Harmer, Tara L.; Hauser, Loren J.; Hugler, Michael; Kerfeld, Cheryl A.; Klotz, Martin G.; Kong, William W.; Land, Miriam L.; Lapidus, Alla; Larimer, Frank W.; Longo, Dana L.; Lucas, Susan; Malfatti, Stephanie A.; Massey, Steven E.; Martin, Darlene D.; McCuddin, Zoe; Meyer, Folker; Moore, Jessica L.; Ocampo, Luis H.; Paul, John H.; Paulsen, Ian T.; Reep, Douglas K.; Ren, Qinghu; Ross, Rachel L.; Sato, Priscila Y.; Thomas, Phaedra; Tinkham, Lance E.; Zeruth, Gary T. (Public Library of Science (PLoS), 2006-11-14)
    Presented here is the complete genome sequence of Thiomicrospira crunogena XCL-2, representative of ubiquitous chemolithoautotrophic sulfur-oxidizing bacteria isolated from deep-sea hydrothermal vents. This gammaproteob ...
  • Sievert, Stefan M.; Scott, Kathleen M.; Klotz, Martin G.; Chain, Patrick S. G.; Hauser, Loren J.; Hemp, James; Hugler, Michael; Land, Miriam L.; Lapidus, Alla; Larimer, Frank W.; Lucas, Susan; Malfatti, Stephanie A.; Meyer, Folker; Paulsen, Ian T.; Ren, Qinghu; Simon, Jorg; USF Genomics Class (American Society for Microbiology, 2007-12-07)
    Sulfur-oxidizing epsilonproteobacteria are common in a variety of sulfidogenic environments. These autotrophic and mixotrophic sulfur-oxidizing bacteria are believed to contribute substantially to the oxidative portion of ...
  • Abad, Pierre; Gouzy, Jerome; Aury, Jean-Marc; Castagnone-Sereno, Philippe; Danchin, Etienne G. J.; Deleury, Emeline; Perfus-Barbeoch, Laetitia; Anthouard, Veronique; Artiguenave, Francois; Blok, Vivian C.; Caillaud, Marie-Cecile; Coutinho, Pedro M.; Da Silva, Corinne; De Luca, Francesca; Deau, Florence; Esquibet, Magali; Flutre, Timothe; Goldstone, Jared V.; Hamamouch, Noureddine; Hewezi, Tarek; Jaillon, Olivier; Jubin, Claire; Leonetti, Paola; Magliano, Marc; Maier, Tom R.; Markov, Gabriel V.; McVeigh, Paul; Pesole, Graziano; Poulain, Julie; Robinson-Rechavi, Marc; Sallet, Erika; Segurens, Beatrice; Steinbach, Delphine; Tytgat, Tom; Ugarte, Edgardo; van Ghelder, Cyril; Veronico, Pasqua; Baum, Thomas J.; Blaxter, Mark; Bleve-Zacheo, Teresa; Davis, Eric L; Ewbank, Jonathan J.; Favery, Bruno; Grenier, Eric; Henrissat, Bernard; Jones, John T.; Laudet, Vincent; Maule, Aaron G.; Quesneville, Hadi; Rosso, Marie-Noelle; Schiex, Thomas; Smant, Geert; Weissenbach, Jean; Wincker, Patrick (Nature Publishing Group, 2008-07-27)
    Plant-parasitic nematodes are major agricultural pests worldwide and novel approaches to control them are sorely needed. We report the draft genome sequence of the root-knot nematode Meloidogyne incognita, a biotrophic ...
  • Gladyshev, Eugene A.; Arkhipova, Irina R. (2010-01)
    Bdelloid rotifers are microscopic invertebrate animals best known for their ancient asexuality and the ability to survive desiccation at any life stage. Both factors are expected to have a profound influence on their ...
  • Serres, Margrethe H.; Riley, Monica (American Society for Microbiology, 2006-07)
    Genomic sequences have been used to find the genetic foundation for carbon source metabolism in Shewanella oneidensis MR-1. Annotated S. oneidensis MR-1 gene products were examined for their sequence similarity to enzymes ...
  • Flot, Jean-Francois; Hespeels, Boris; Li, Xiang; Noel, Benjamin; Arkhipova, Irina R.; Danchin, Etienne G. J.; Hejno, Andreas; Henrissat, Bernard; Koszul, Romain; Aury, Jean-Marc; Barbe, Valerie; Barthelemy, Roxane-Marie; Bast, Jens; Bazykin, Georgii A.; Chabrol, Olivier; Couloux, Arnaud; Da Rocha, Martine; Da Silva, Corinne; Gladyshev, Eugene A.; Gouret, Philippe; Hallatschek, Oskar; Hecox-Lea, Bette; Labadie, Karine; Lejeune, Benjamin; Piskurek, Oliver; Poulain, Julie; Rodriguez, Fernando; Ryan, Joseph F.; Vakhrusheva, Olga A.; Wajnberg, Eric; Wirth, Benedicte; Yushenova, Irina A.; Kellis, Manolis; Kondrashov, Alexey S.; Mark Welch, David B.; Pontarotti, Pierre; Weissenbach, Jean; Wincker, Patrick; Jaillon, Olivier; Van Doninck, Karine (Nature Publishing Group, 2013-07-21)
    Loss of sexual reproduction is considered an evolutionary dead end for metazoans, but bdelloid rotifers challenge this view as they appear to have persisted asexually for millions of years1. Neither male sex organs nor ...
  • Arkhipova, Irina R.; Batzer, Mark A.; Brosius, Juergen; Feschotte, Cedric; Moran, John V.; Schmitz, Jurgen; Jurka, Jerzy (BioMed Central, 2012-11-21)
    The third international conference on the genomic impact of eukaryotic transposable elements (TEs) was held 24 to 28 February 2012 at the Asilomar Conference Center, Pacific Grove, CA, USA. Sponsored in part by the National ...
  • Riley, Monica; Staley, James T.; Danchin, Antoine; Wang, Ting Zhang; Brettin, Thomas S.; Hauser, Loren J.; Land, Miriam L.; Thompson, Linda S. (BioMed Central, 2008-05-06)
    The genome sequence of the sea-ice bacterium Psychromonas ingrahamii 37, which grows exponentially at -12C, may reveal features that help to explain how this extreme psychrophile is able to grow at such low temperatures. ...
  • Field, Dawn; Amaral-Zettler, Linda A.; Cochrane, Guy R.; Cole, James R.; Dawyndt, Peter; Garrity, George M.; Gilbert, Jack A.; Glockner, Frank Oliver; Hirschman, Lynette; Karsch-Mizrachi, Ilene; Klenk, Hans-Peter; Knight, Rob; Kottmann, Renzo; Kyrpides, Nikos C.; Meyer, Folker; San Gil, Inigo; Sansone, Susanna-Assunta; Schriml, Lynn M.; Sterk, Peter; Tatusova, Tatiana; Ussery, David W.; White, Owen; Wooley, John (Public Library of Science, 2011-06-21)
    A vast and rich body of information has grown up as a result of the world's enthusiasm for 'omics technologies. Finding ways to describe and make available this information that maximise its usefulness has become a major ...

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