http://lod.bco-dmo.org/id/dataset/719556
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2017-11-17
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Distribution of benthic invertebrates along the East Coast, USA, ranging from latitudes 38.61283 to 29.753272.
2017-11-17
publication
2017-11-17
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2020-11-25
publication
https://doi.org/10.26008/1912/bco-dmo.719556.1
Nicole Lopanik
Georgia Institute of Technology
principalInvestigator
Grace Lim-Fong
Randolph-Macon College
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
documentDigital
Cite this dataset as: Lopanik, N., Lim-Fong, G. (2017) Distribution of benthic invertebrates along the East Coast, USA, ranging from latitudes 38.61283 to 29.753272. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2017-11-17 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.719556.1 [access date]
Distribution of benthic invertebrates along the East Coast, USA Dataset Description: <p>Distribution of benthic invertebrates along the East Coast, USA from latitudes 38.61283 to 29.753272.</p> Acquisition Description: <p>Samples were collected by hand using a 15x15 cm grid placed randomly on submerged area of floating dock, and identified by eye. For some colonial organisms (sponges, hydroids, tunicates, bryozoans), enumeration was challenging. Zeros&nbsp;indicate no animals in that group were found in that sample.</p>
<p>Temperature was measured with a digital thermometer, and salinity with a refractometer at the time of collection.</p>
Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1608709 Award URL: http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1608709
completed
Nicole Lopanik
Georgia Institute of Technology
404-894-1754
EAS 311 Ferst Drive
Atlanta
GA
30332
USA
nicole.lopanik@eas.gatech.edu
pointOfContact
Grace Lim-Fong
Randolph-Macon College
804-752-3725
304 Caroline St.
Ashland
VA
23005
USA
glim@rmc.edu
pointOfContact
asNeeded
Dataset Version: 1
Unknown
date
location
location_descrip
location_code
Latitude
Longitude
temp
salinity
grid_num
sponge_random
sponge_orange
sponge_yellow
sponge_purp_gray
sponge_pink
sponge_green
spong_orange_encr
Anemone
hydroid
hydroid_tubularia
crab
barnacle
oyster
mussel
snail
nudibranch
limpet
worm_red
worm_green
tubeworm
ragworm
tunicate_orange
tunicate_black
molgula
styela
ecteinascidia_like_tunicate
white_tunicate_clavelina
clear_tunicate
stalked_tunicate
encrusting_bryozoan
bugula_sp
B_neritina
total_count
sponge_tot
anemone_tot
hydroid_tot
barnacle_tot
oyster_tot
mussel_tot
other_mollusk_tot
worm_tot
colonial_tun_tot
solitary_tun_tot
encr_bry_tot
B_stolon_tot
B_neritina_tot
total
total_minus_bry
sponge_prop
anemone_prop
hydroid_prop
barnacle_prop
oyster_prop
mussel_prop
other_mollusk_prop
worm_prop
colonial_tun_prop
solitary_tun_prop
encr_bry_prop
B_stolon_prop
B_neritina_prop
total_prop
sponge_minus_bry_prop
anemone_minus_bry_prop
hydroid_minus_bry_prop
barnacle_minus_bry_prop
mollusks_minus_bry_prop
worm_minus_bry_prop
tunicates_minus_bry_prop
total_minus_bry_prop
theme
None, User defined
date
site
Site_ID
latitude
longitude
water temperature
salinity calculated from CTD primary sensors
replicate
count
no standard parameter
featureType
BCO-DMO Standard Parameters
Refractometer
digital thermometer
instrument
BCO-DMO Standard Instruments
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
Biogeography of a marine defensive microbial symbiont: relative importance of host defense vs. abiotic factors
https://www.bco-dmo.org/project/645348
Biogeography of a marine defensive microbial symbiont: relative importance of host defense vs. abiotic factors
<p>Recent research has shown that microorganisms can be very important to their eukaryotic hosts, by providing nutrition or contributing to host defense against enemies, such as pathogens or predators. In many cases, however, hosting a bacterial symbiont imposes a physiological cost on the host organism, resulting in reduced growth or reproduction in the presence of the symbiont. Further, these costs may be more pronounced in some habitats than others, causing natural selection to act in eliminating symbiont-containing hosts from the population. In this project, the investigators are studying the relationship between the marine bryozoan invertebrate, Bugula neritina, and its uncultured symbiont. The symbiont produces natural products with activity against cancer, Alzheimer's disease, and HIV. Interestingly, these compounds also are distasteful and protect larvae from predators, indicating that this symbiotic relationship is defensive in nature. Along the East Coast of the US, the investigators have found a much higher proportion of individuals that have the defensive symbiont at lower latitudes, while the symbiont is absent in individuals collected at higher latitudes. This pattern is consistent with the theory that higher predation pressure exists at lower latitudes. Other environmental factors, such as temperature, can also vary over a wide geographical area, and may also play a role in influencing the relationship. In this project, the investigators will evaluate the ecological and environmental parameters that influence the distribution of a defensive symbiont, including predation pressure and temperature. Defensive symbionts represent another level of ecological complexity, and likely play an important role in structuring marine communities. This study will provide insight into how environmental factors can influence host-symbiont interactions and drive partner co-evolution. Furthermore, the bioactive products have pharmaceutical potential, and understanding how environmental factors influence the relationship between B. neritina and its symbiont may improve bioprospecting for novel compounds that could be developed into drugs.</p>
<p>
In this research, the investigators will determine the ecological and environmental parameters that influence the distribution of a defensive symbiont in the marine bryozoan, Bugula neritina. The goal of this research is to determine the mechanism that results in the defensive endosymbiont being restricted to hosts that inhabit lower latitudes. This pattern of symbiont distribution could be the result of differing levels of costs and benefits at different latitudes: where predation pressure is low, the costs of hosting the symbiont outweigh the benefits, and aposymbiotic individuals outcompete their symbiotic conspecifics. In areas of higher predation, the defensive benefit outweighs the cost, and symbiotic individuals have higher survival rates than their undefended, aposymbiotic conspecifics. An alternative, but not mutually exclusive hypothesis, is that symbiont growth is inhibited at higher latitudes, where it is not as beneficial, and growth is induced in areas of higher predation. Specific goals are to determine if (1) a biogeographical cline in predation pressure corresponds to a gradient of symbiont frequency associating with the host, (2) symbiotic hosts have a higher fitness at low latitudes, and aposymbiotic hosts have a higher fitness at high latitudes, and (3) symbiont growth is promoted at low latitudes and inhibited at high latitudes. A combination of field and laboratory-based experiments will be conducted using ecological and molecular biology techniques. Bioactive compounds produced by symbionts of marine invertebrates can mediate multi-trophic interactions and potentially influence benthic community structure. There has been almost no research, however, on how ecological and environmental parameters influence the distribution of marine defensive endosymbionts.</p>
<p>Related Reference:</p>
<p>Linneman J, Paulus D, Lim-Fong G, Lopanik NB (2014) Latitudinal Variation of a Defensive Symbiosis in the Bugula neritina (Bryozoa) Sibling Species Complex. PLoS ONE 9(10): e108783. doi:<a href="http://dx.doi.org/10.1371/journal.pone.0108783" target="_blank">10.1371/journal.pone.0108783</a></p>
BiogeogDefensiveSymb
largerWorkCitation
project
eng; USA
biota
oceans
-81.421
-75.072524
29.753272
38.61283
2015-03-16
2016-06-21
Western Atlantic coast, ranging from latitudes 38.61283 to 29.753272
0
BCO-DMO catalogue of parameters from Distribution of benthic invertebrates along the East Coast, USA, ranging from latitudes 38.61283 to 29.753272.
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/719566.rdf
Name: date
Units: unitless
Description: Date of collection, formatted as mm/dd/yyyy
http://lod.bco-dmo.org/id/dataset-parameter/719567.rdf
Name: location
Units: unitless
Description: Location samples collected
http://lod.bco-dmo.org/id/dataset-parameter/719568.rdf
Name: location_descrip
Units: unitless
Description: Specific area within location where samples were collected
http://lod.bco-dmo.org/id/dataset-parameter/719569.rdf
Name: location_code
Units: unitless
Description: Location code
http://lod.bco-dmo.org/id/dataset-parameter/719570.rdf
Name: Latitude
Units: decimal degrees
Description: Latitude of location
http://lod.bco-dmo.org/id/dataset-parameter/719571.rdf
Name: Longitude
Units: decimal degrees
Description: Longitude of location
http://lod.bco-dmo.org/id/dataset-parameter/719572.rdf
Name: temp
Units: degrees Celsius
Description: Water temperature
http://lod.bco-dmo.org/id/dataset-parameter/719573.rdf
Name: salinity
Units: parts per thousand
Description: Water salinity
http://lod.bco-dmo.org/id/dataset-parameter/719574.rdf
Name: grid_num
Units: unitless
Description: Sampling effort replicate
http://lod.bco-dmo.org/id/dataset-parameter/719575.rdf
Name: sponge_random
Units: unitless
Description: Random sponge count
http://lod.bco-dmo.org/id/dataset-parameter/719576.rdf
Name: sponge_orange
Units: unitless
Description: Orange sponge count
http://lod.bco-dmo.org/id/dataset-parameter/719577.rdf
Name: sponge_yellow
Units: unitless
Description: Yellow sponge count
http://lod.bco-dmo.org/id/dataset-parameter/719578.rdf
Name: sponge_purp_gray
Units: unitless
Description: Purple/gray sponge count
http://lod.bco-dmo.org/id/dataset-parameter/719579.rdf
Name: sponge_pink
Units: unitless
Description: Pink sponge count
http://lod.bco-dmo.org/id/dataset-parameter/719580.rdf
Name: sponge_green
Units: unitless
Description: Green sponge count
http://lod.bco-dmo.org/id/dataset-parameter/719581.rdf
Name: spong_orange_encr
Units: unitless
Description: Orange encr. sponge count
http://lod.bco-dmo.org/id/dataset-parameter/719582.rdf
Name: Anemone
Units: unitless
Description: Anemone count
http://lod.bco-dmo.org/id/dataset-parameter/719583.rdf
Name: hydroid
Units: unitless
Description: Hydroid count
http://lod.bco-dmo.org/id/dataset-parameter/719584.rdf
Name: hydroid_tubularia
Units: unitless
Description: Hydroid (tubularia) count
http://lod.bco-dmo.org/id/dataset-parameter/719585.rdf
Name: crab
Units: unitless
Description: Crab count
http://lod.bco-dmo.org/id/dataset-parameter/719586.rdf
Name: barnacle
Units: unitless
Description: Barnacle count
http://lod.bco-dmo.org/id/dataset-parameter/719587.rdf
Name: oyster
Units: unitless
Description: Oyster count
http://lod.bco-dmo.org/id/dataset-parameter/719588.rdf
Name: mussel
Units: unitless
Description: Mussel count
http://lod.bco-dmo.org/id/dataset-parameter/719589.rdf
Name: snail
Units: unitless
Description: Snail count
http://lod.bco-dmo.org/id/dataset-parameter/719590.rdf
Name: nudibranch
Units: unitless
Description: Nudibranch count
http://lod.bco-dmo.org/id/dataset-parameter/719591.rdf
Name: limpet
Units: unitless
Description: Limpet count
http://lod.bco-dmo.org/id/dataset-parameter/719592.rdf
Name: worm_red
Units: unitless
Description: Red worm count
http://lod.bco-dmo.org/id/dataset-parameter/719593.rdf
Name: worm_green
Units: unitless
Description: Green worm count
http://lod.bco-dmo.org/id/dataset-parameter/719594.rdf
Name: tubeworm
Units: unitless
Description: Tubeworm count
http://lod.bco-dmo.org/id/dataset-parameter/719595.rdf
Name: ragworm
Units: unitless
Description: Ragworm count
http://lod.bco-dmo.org/id/dataset-parameter/719596.rdf
Name: tunicate_orange
Units: unitless
Description: Orange tunicate count
http://lod.bco-dmo.org/id/dataset-parameter/719597.rdf
Name: tunicate_black
Units: unitless
Description: Black tunicate count
http://lod.bco-dmo.org/id/dataset-parameter/719598.rdf
Name: molgula
Units: unitless
Description: Molgula count
http://lod.bco-dmo.org/id/dataset-parameter/719599.rdf
Name: styela
Units: unitless
Description: Styela count
http://lod.bco-dmo.org/id/dataset-parameter/719600.rdf
Name: ecteinascidia_like_tunicate
Units: unitless
Description: Ecteinascidia-like tunicate count
http://lod.bco-dmo.org/id/dataset-parameter/719601.rdf
Name: white_tunicate_clavelina
Units: unitless
Description: White tunicate/clavelina count
http://lod.bco-dmo.org/id/dataset-parameter/719602.rdf
Name: clear_tunicate
Units: unitless
Description: Clear tunicate count
http://lod.bco-dmo.org/id/dataset-parameter/719603.rdf
Name: stalked_tunicate
Units: unitless
Description: Stalked tunicate count
http://lod.bco-dmo.org/id/dataset-parameter/719604.rdf
Name: encrusting_bryozoan
Units: unitless
Description: Encrusting bryozoan count
http://lod.bco-dmo.org/id/dataset-parameter/719605.rdf
Name: bugula_sp
Units: unitless
Description: Bugula sp. count
http://lod.bco-dmo.org/id/dataset-parameter/719606.rdf
Name: B_neritina
Units: unitless
Description: B. neritina count
http://lod.bco-dmo.org/id/dataset-parameter/719607.rdf
Name: total_count
Units: unitless
Description: Total count
http://lod.bco-dmo.org/id/dataset-parameter/719608.rdf
Name: sponge_tot
Units: unitless
Description: Total sponge count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719609.rdf
Name: anemone_tot
Units: unitless
Description: Total anemone count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719610.rdf
Name: hydroid_tot
Units: unitless
Description: Total hydroid count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719611.rdf
Name: barnacle_tot
Units: unitless
Description: Total barnacle count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719612.rdf
Name: oyster_tot
Units: unitless
Description: Total oyster count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719613.rdf
Name: mussel_tot
Units: unitless
Description: Total mussel count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719614.rdf
Name: other_mollusk_tot
Units: unitless
Description: Total other mollusk count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719615.rdf
Name: worm_tot
Units: unitless
Description: Total worm count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719616.rdf
Name: colonial_tun_tot
Units: unitless
Description: Total colonial tunicate count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719617.rdf
Name: solitary_tun_tot
Units: unitless
Description: Total solitary tunicate count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719618.rdf
Name: encr_bry_tot
Units: unitless
Description: Total encrusting bryozoan count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719619.rdf
Name: B_stolon_tot
Units: unitless
Description: Total B. stolon count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719620.rdf
Name: B_neritina_tot
Units: unitless
Description: Total B. neritina count (counts summed by taxonomic grouping)
http://lod.bco-dmo.org/id/dataset-parameter/719621.rdf
Name: total
Units: unitless
Description: Total of counts summed by taxonomic grouping
http://lod.bco-dmo.org/id/dataset-parameter/719622.rdf
Name: total_minus_bry
Units: unitless
Description: Total of counts summed by taxonomic grouping minus the bryozoans
http://lod.bco-dmo.org/id/dataset-parameter/719623.rdf
Name: sponge_prop
Units: unitless
Description: sponge_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719624.rdf
Name: anemone_prop
Units: unitless
Description: anemone_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719625.rdf
Name: hydroid_prop
Units: unitless
Description: hydroid_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719626.rdf
Name: barnacle_prop
Units: unitless
Description: barnacle_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719627.rdf
Name: oyster_prop
Units: unitless
Description: oyster_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719628.rdf
Name: mussel_prop
Units: unitless
Description: mussel_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719629.rdf
Name: other_mollusk_prop
Units: unitless
Description: other_mullusk_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719630.rdf
Name: worm_prop
Units: unitless
Description: worm_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719631.rdf
Name: colonial_tun_prop
Units: unitless
Description: colonial_tun_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719632.rdf
Name: solitary_tun_prop
Units: unitless
Description: solitary_tun_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719633.rdf
Name: encr_bry_prop
Units: unitless
Description: encr_bry_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719634.rdf
Name: B_stolon_prop
Units: unitless
Description: B_stolon_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719635.rdf
Name: B_neritina_prop
Units: unitless
Description: B_neritina_tot as a proportion
http://lod.bco-dmo.org/id/dataset-parameter/719636.rdf
Name: total_prop
Units: unitless
Description: Total of proportions
http://lod.bco-dmo.org/id/dataset-parameter/719637.rdf
Name: sponge_minus_bry_prop
Units: unitless
Description: Sponge proportion after removing bryozoan counts
http://lod.bco-dmo.org/id/dataset-parameter/719638.rdf
Name: anemone_minus_bry_prop
Units: unitless
Description: Anemone proportion after removing bryozoan counts
http://lod.bco-dmo.org/id/dataset-parameter/719639.rdf
Name: hydroid_minus_bry_prop
Units: unitless
Description: Hydroid proportion after removing bryozoan counts
http://lod.bco-dmo.org/id/dataset-parameter/719640.rdf
Name: barnacle_minus_bry_prop
Units: unitless
Description: Barnacle proportion after removing bryozoan counts
http://lod.bco-dmo.org/id/dataset-parameter/719641.rdf
Name: mollusks_minus_bry_prop
Units: unitless
Description: Mollusks proportion after removing bryozoan counts
http://lod.bco-dmo.org/id/dataset-parameter/719642.rdf
Name: worm_minus_bry_prop
Units: unitless
Description: Worm proportion after removing bryozoan counts
http://lod.bco-dmo.org/id/dataset-parameter/719643.rdf
Name: tunicates_minus_bry_prop
Units: unitless
Description: Tunicates proportion after removing bryozoan counts
http://lod.bco-dmo.org/id/dataset-parameter/719644.rdf
Name: total_minus_bry_prop
Units: unitless
Description: Total of proportions after removing bryozoan counts
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
https://www.bco-dmo.org/dataset/719556/data/download
download
onLine
dataset
<p>Samples were collected by hand using a 15x15 cm grid placed randomly on submerged area of floating dock, and identified by eye. For some colonial organisms (sponges, hydroids, tunicates, bryozoans), enumeration was challenging. Zeros&nbsp;indicate no animals in that group were found in that sample.</p>
<p>Temperature was measured with a digital thermometer, and salinity with a refractometer at the time of collection.</p>
Specified by the Principal Investigator(s)
<p>We have analyzed the proportions at differing latitudes and performed regression analysis with various factors (latitude, longitude, temperature, salinity) using SPSS Statistics 24.</p>
<p>BCO-DMO Processing:<br />
- copied date, location name, location code, lat, lon, temp, and sal to each relevant row (was only included the first row for each sample set);<br />
- created location_descrip column for more detailed location place name;<br />
- modified parameter names;<br />
- moved "Total" to the "Grid" column;<br />
- removed commas and apostrophes from place names; replaced spaces with underscores;<br />
- replaced blanks&nbsp;with "nd" (no data).</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
PI Supplied Instrument Name: Instrument Name: Refractometer Instrument Short Name:Refractometer Instrument Description: A refractometer is a laboratory or field device for the measurement of an index of refraction (refractometry). The index of refraction is calculated from Snell's law and can be calculated from the composition of the material using the Gladstone-Dale relation.
In optics the refractive index (or index of refraction) n of a substance (optical medium) is a dimensionless number that describes how light, or any other radiation, propagates through that medium.
PI Supplied Instrument Name: Instrument Name: digital thermometer Instrument Short Name: Instrument Description: An instrument that measures temperature digitally.