http://lod.bco-dmo.org/id/dataset/3855
eng; USA
utf8
dataset
Highest level of data collection, from a common set of sensors or instrumentation, usually within the same research project
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
2013-01-15
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Dissolved organic carbon (DOC) from US GEOTRACES North Atlantic Transect cruise on the R/V Knorr KN199-04 in the subtropical N. Atlantic in 2010 (U.S. GEOTRACES NAT project)
2013-01-14
publication
2013-01-14
revision
Marine Biological Laboratory/Woods Hole Oceanographic Institution Library (MBLWHOI DLA)
2020-05-01
publication
https://doi.org/10.26008/1912/bco-dmo.3855.1
Joaquin Chaves
National Aeronautics and Space Administration
principalInvestigator
Charles McClain
National Aeronautics and Space Administration
principalInvestigator
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
publisher
documentDigital
Cite this dataset as: Chaves, J., McClain, C. (2013) Dissolved organic carbon (DOC) from US GEOTRACES North Atlantic Transect cruise on the R/V Knorr KN199-04 in the subtropical N. Atlantic in 2010 (U.S. GEOTRACES NAT project). Dataset version 2013-01-14 [if applicable, indicate subset used]. doi:10.26008/1912/bco-dmo.3855.1 [access date]
Dissolved organic carbon (DOC) data from the GT10 cruise KN199-04 Dataset Description: <p>Dissolved organic carbon (DOC) on samples were collected during Geotraces 2010 (KN199-04).</p>
<p>The following metadata was extracted from the original file header:</p>
<p>/begin_header&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/investigators=Joaquin_Chaves&nbsp;&nbsp;&nbsp; Charles_McClain&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/affiliations=NASA&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/contact=joaquin.chaves@nasa.gov&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/experiment=GEOTRACES &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/cruise=kn199-04&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/station=NA&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/data_file_name=kn199-04_DOC_BCODMO.csv&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/documents=DOC_protocols.pdf&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/calibration_files=kn199-04_DOC_run.pdf&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/data_type=bottle&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/data_status=final&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/start_date=20101016&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/end_date=20101103&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/start_time=15:10:00[GMT]&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/end_time=00:19:00[GMT]&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/north_latitude=38.3307[DEG]&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/south_latitude=17.3497[DEG]&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/east_longitude=-9.66[DEG]&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/west_longitude=-24.4998[DEG]&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/water_depth=-999&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/measurement_depth=-999&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/secchi_depth=-999&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/wind_speed=-999&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/cloud_percent=-999&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;<br />
/wave_height=-999&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp; &nbsp;&nbsp; !&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;<br />
! The field "replicates" indicates how many replicate samples were&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;<br />
! averaged to produce the reported value&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;<br />
-----<br />
<strong>Note</strong>:&nbsp; The following header line was incorrect and subsequently corrected by BCO-DMO&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;<br />
! sample_no==-999 were collected with NASA's surface peristaltic pump&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;<br />
----<br />
! quality = 1 good; 2 = medium; 3 = suspect&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;<br />
!&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;<br />
/missing=-999&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;<br />
/delimiter=comma&nbsp;&nbsp;&nbsp;</p> Acquisition Description: <p><strong>Methods for the Collection and Measurement of Dissolved Organic Carbon (DOC):</strong> Seawater samples for analysis of dissolved organic carbon (DOC) and chromophoric dissolved organic matter (CDOM) absorption are filtered under a gentle vacuum (&lt;5 in Hg) through pre-combusted (6 hours at 450°C) Whatman GF/F glass fiber filters and collected directly into pre-cleaned and pre-combusted sample glass bottles and vials. Duplicate samples at the surface and single samples at depth are collected for DOC analysis and stored frozen at -20°C. Samples are measured by high temperature combustion oxidation (HTCO) on a Shimadzu TOC-L carbon analyzer. Mean of replicate runs for individual samples must maintain a standard deviation &lt;2% for a minimum of 3 of 7 injections (Benner and Strom 1993; Sharp et al. 2002; Mannino et al. 2008). Accuracy of analyses is monitored by running DOC consensus reference material standards (CRM; Hansell Laboratory, University of Miami RSMAS); CRM measurements must maintain an analytical error to within ±5% of the consensus values.</p>
<p>Standard curves of the manufacturer-recommended carbon standard, potassium hydrogen phthalate (KHP), ranging from ~500 to 4000 μg C L-1 and from ~500 to 2000 μg C L-1 are conducted daily. KHP check standards are interspersed between every 6 samples for each sample batch to verify the consistency of the standard curve throughout each sample batch analyzed. To minimize salt accumulation in the instrument flow path, Milli-Q water blanks are inserted between every 3 samples for each batch of samples. Injection volumes for seawater samples, standards and blanks are typically 120μL.</p>
Funding provided by National Aeronautics & Space Administration (NASA) Award Number: NNX09AN94G
completed
Joaquin Chaves
National Aeronautics and Space Administration
NASA Goddard Space Flight Center
Greenbelt
MD
joaquin.e.chavescedeno@nasa.gov
pointOfContact
Charles McClain
National Aeronautics and Space Administration
USA
charles.r.mcclain@nasa.gov
pointOfContact
asNeeded
Dataset Version: 1
Unknown
lat
lon
time_gmt
yrday_gmt
date_gmt
depth
DOC
DOC_sd
replicate
DOC_qf
cruise_id
station_GEOTRC
cast_GEOTRC
event_GEOTRC
sample_GEOTRC
sample_bottle_GEOTRC
bottle_GEOTRC
depth_GEOTRC_CTD
BTL_ISO_DateTime_UTC
Niskin bottle
Pump surface
Total Organic Carbon Analyzer
theme
None, User defined
latitude
longitude
time_gmt
yrday_gmt
date_gmt
depth
dissolved organic Carbon
dissolved organic Carbon standard deviation
replicate
quality flag
cruise id
station
cast
event
sample identification
bottle
ISO_DateTime_UTC
featureType
BCO-DMO Standard Parameters
Niskin bottle
Pump surface
Total Organic Carbon Analyzer
instrument
BCO-DMO Standard Instruments
KN199-04
service
Deployment Activity
Subtropical northern Atlantic Ocean
place
Locations
otherRestrictions
otherRestrictions
Access Constraints: none. Use Constraints: Please follow guidelines at: http://www.bco-dmo.org/terms-use Distribution liability: Under no circumstances shall BCO-DMO be liable for any direct, incidental, special, consequential, indirect, or punitive damages that result from the use of, or the inability to use, the materials in this data submission. If you are dissatisfied with any materials in this data submission your sole and exclusive remedy is to discontinue use.
U.S. GEOTRACES
http://www.geotraces.org/
U.S. GEOTRACES
GEOTRACES is a SCOR sponsored program; and funding for program infrastructure development is provided by the U.S. National Science Foundation.
GEOTRACES gained momentum following a special symposium, S02: Biogeochemical cycling of trace elements and isotopes in the ocean and applications to constrain contemporary marine processes (GEOSECS II), at a 2003 Goldschmidt meeting convened in Japan. The GEOSECS II acronym referred to the Geochemical Ocean Section Studies To determine full water column distributions of selected trace elements and isotopes, including their concentration, chemical speciation, and physical form, along a sufficient number of sections in each ocean basin to establish the principal relationships between these distributions and with more traditional hydrographic parameters;
* To evaluate the sources, sinks, and internal cycling of these species and thereby characterize more completely the physical, chemical and biological processes regulating their distributions, and the sensitivity of these processes to global change; and
* To understand the processes that control the concentrations of geochemical species used for proxies of the past environment, both in the water column and in the substrates that reflect the water column.
GEOTRACES will be global in scope, consisting of ocean sections complemented by regional process studies. Sections and process studies will combine fieldwork, laboratory experiments and modelling. Beyond realizing the scientific objectives identified above, a natural outcome of this work will be to build a community of marine scientists who understand the processes regulating trace element cycles sufficiently well to exploit this knowledge reliably in future interdisciplinary studies.
Expand "Projects" below for information about and data resulting from individual US GEOTRACES research projects.
U.S. GEOTRACES
largerWorkCitation
program
U.S. GEOTRACES North Atlantic Transect
http://www.geotraces.org/
U.S. GEOTRACES North Atlantic Transect
<p><em>Much of this text appeared in an article published in OCB News, October 2008, by the OCB Project Office.</em></p>
<p>The first U.S. GEOTRACES Atlantic Section will be specifically centered around a sampling cruise to be carried out in the North Atlantic in 2010. Ed Boyle (MIT) and Bill Jenkins (WHOI) organized a three-day planning workshop that was held September 22-24, 2008 at the Woods Hole Oceanographic Institution. The main goal of the workshop, sponsored by the National Science Foundation and the U.S. GEOTRACES Scientific Steering Committee, was to design the implementation plan for the first U.S. GEOTRACES Atlantic Section. The primary cruise design motivation was to improve knowledge of the sources, sinks and internal cycling of Trace Elements and their Isotopes (TEIs) by studying their distributions along a section in the North Atlantic (Figure 1). The North Atlantic has the full suite of processes that affect TEIs, including strong meridional advection, boundary scavenging and source effects, aeolian deposition, and the salty Mediterranean Outflow. The North Atlantic is particularly important as it lies at the "origin" of the global Meridional Overturning Circulation.</p>
<p>It is well understood that many trace metals play important roles in biogeochemical processes and the carbon cycle, yet very little is known about their large-scale distributions and the regional scale processes that affect them. Recent advances in sampling and analytical techniques, along with advances in our understanding of their roles in enzymatic and catalytic processes in the open ocean provide a natural opportunity to make substantial advances in our understanding of these important elements. Moreover, we are motivated by the prospect of global change and the need to understand the present and future workings of the ocean's biogeochemistry. The GEOTRACES strategy is to measure a broad suite of TEIs to constrain the critical biogeochemical processes that influence their distributions. In addition to these "exotic" substances, more traditional properties, including macronutrients (at micromolar and nanomolar levels), CTD, bio-optical parameters, and carbon system characteristics will be measured. The cruise starts at Line W, a repeat hydrographic section southeast of Cape Cod, extends to Bermuda and subsequently through the North Atlantic oligotrophic subtropical gyre, then transects into the African coast in the northern limb of the coastal upwelling region. From there, the cruise goes northward into the Mediterranean outflow. The station locations shown on the map are for the "fulldepth TEI" stations, and constitute approximately half of the stations to be ultimately occupied.</p>
<p><em>Figure 1. The proposed 2010 Atlantic GEOTRACES cruise track plotted on dissolved oxygen at 400 m depth. Data from the World Ocean Atlas (Levitus et al., 2005) were plotted using Ocean Data View (courtesy Reiner Schlitzer). [click on the image to view a larger version]</em><br /><a href="http://bcodata.whoi.edu/US_GEOTRACES/AtlanticSection/GEOTRACES_Atl_stas.jpg" target="_blank"><img alt="" src="https://datadocs.bco-dmo.org/d2/US_GEOTRACES/AtlanticSection/GEOTRACES_Atl_stas.jpg" style="width:350px" /></a></p>
<p>Hydrography, CTD and nutrient measurements will be supported by the Ocean Data Facility (J. Swift) at Scripps Institution of Oceanography and funded through NSF Facilities. They will be providing an additional CTD rosette system along with nephelometer and LADCP. A trace metal clean Go-Flo Rosette and winch will be provided by the group at Old Dominion University (G. Cutter) along with a towed underway pumping system.</p>
<p>The North Atlantic Transect cruise began in 2010 with KN199 leg 4 (station sampling) and leg 5 (underway sampling only) (Figure 2).</p>
<p><a href="http://bcodata.whoi.edu//US_GEOTRACES/AtlanticSection/Cruise_Report_for_Knorr_199_Final_v3.pdf" target="_blank">KN199-04 Cruise Report (PDF)</a></p>
<p><em>Figure 2. The red line shows the cruise track for the first leg of the US Geotraces North Atlantic Transect on the R/V Knorr in October 2010. The rest of the stations (beginning with 13) will be completed in October-December 2011 on the R/V Knorr (courtesy of Bill Jenkins, Chief Scientist, GNAT first leg). [click on the image to view a larger version]</em><br /><a href="http://bcodata.whoi.edu/US_GEOTRACES/AtlanticSection/GNAT_stationPlan.jpg" target="_blank"><img alt="Atlantic Transect Station location map" src="https://datadocs.bco-dmo.org/d2/US_GEOTRACES/AtlanticSection/GNAT_stationPlan_sm.jpg" style="width:350px" /></a></p>
<p>The section completion effort resumed again in November 2011 with KN204-01A,B (Figure 3).</p>
<p><a href="http://bcodata.whoi.edu//US_GEOTRACES/AtlanticSection/Submitted_Preliminary_Cruise_Report_for_Knorr_204-01.pdf" target="_blank">KN204-01A,B Cruise Report (PDF)</a></p>
<p><em>Figure 3. Station locations occupied on the US Geotraces North Atlantic Transect on the R/V Knorr in November 2011. [click on the image to view a larger version]</em><br /><a href="http://bcodata.whoi.edu/US_GEOTRACES/AtlanticSection/KN204-01_Stations.png" target="_blank"><img alt="Atlantic Transect/Part 2 Station location map" src="https://datadocs.bco-dmo.org/d2/US_GEOTRACES/AtlanticSection/KN204-01_Stations.png" style="width:350px" /></a></p>
<p>Data from the North Atlantic Transect cruises are available under the Datasets heading below, and consensus values for the SAFe and North Atlantic GEOTRACES Reference Seawater Samples are available from the GEOTRACES Program Office: <a href="http://www.geotraces.org/science/intercalibration/322-standards-and-reference-materials?acm=455_215" target="_blank">Standards and Reference Materials</a></p>
<p><strong>ADCP data</strong> are available from the Currents ADCP group at the University of Hawaii at the links below:<br /><a href="http://currents.soest.hawaii.edu/uhdas_adcp/year2010.html#kn199_4" target="_blank">KN199-04</a> (leg 1 of 2010 cruise; Lisbon to Cape Verde)<br /><a href="http://currents.soest.hawaii.edu/uhdas_adcp/year2010.html#kn199_5" target="_blank">KN199-05</a> (leg 2 of 2010 cruise; Cape Verde to Charleston, NC)<br /><a href="http://currents.soest.hawaii.edu/uhdas_adcp/year2011.html#kn204_01" target="_blank">KN204-01A</a> (part 1 of 2011 cruise; Woods Hole, MA to Bermuda)<br /><a href="http://currents.soest.hawaii.edu/uhdas_adcp/year2011.html#kn204_02" target="_blank">KN204-01B</a> (part 2 of 2011 cruise; Bermuda to Cape Verde)</p>
U.S. GEOTRACES NAT
largerWorkCitation
project
eng; USA
oceans
Subtropical northern Atlantic Ocean
-24.4998
-9.66
17.3497
38.3307
2010-10-16
2010-11-02
Subtropical western and eastern North Atlantic Ocean
0
BCO-DMO catalogue of parameters from Dissolved organic carbon (DOC) from US GEOTRACES North Atlantic Transect cruise on the R/V Knorr KN199-04 in the subtropical N. Atlantic in 2010 (U.S. GEOTRACES NAT project)
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
http://lod.bco-dmo.org/id/dataset-parameter/32075.rdf
Name: lat
Units: decimal degrees
Description: Latitude component of geographic position where samples were collected.
http://lod.bco-dmo.org/id/dataset-parameter/32076.rdf
Name: lon
Units: decimal degrees
Description: Longitude component of geographic position where samples were collected.
http://lod.bco-dmo.org/id/dataset-parameter/32077.rdf
Name: time_gmt
Units: hhmm
Description: Time of sampling, reported in GMT.
http://lod.bco-dmo.org/id/dataset-parameter/32078.rdf
Name: yrday_gmt
Units: unknown
Description: Year day recorded in GMT time, where Jan 1 is day 1.
http://lod.bco-dmo.org/id/dataset-parameter/32079.rdf
Name: date_gmt
Units: yyyymmdd
Description: Date, recorded in GMT time.
http://lod.bco-dmo.org/id/dataset-parameter/32080.rdf
Name: depth
Units: meters
Description: Sample depth in meters.
http://lod.bco-dmo.org/id/dataset-parameter/32081.rdf
Name: DOC
Units: micromoles/Liter
Description: Dissolved organic Carbon.
http://lod.bco-dmo.org/id/dataset-parameter/32082.rdf
Name: DOC_sd
Units: micromoles/Liter
Description: Standard deviation of DOC measurement.
http://lod.bco-dmo.org/id/dataset-parameter/32083.rdf
Name: replicate
Units: dimensionless
Description: A number indicating how many replicate samples were averaged to produce the reported value.
http://lod.bco-dmo.org/id/dataset-parameter/32084.rdf
Name: DOC_qf
Units: dimensionless
Description: Quality flag associated with DOC determination, where 1 = good; 2 = medium; 3 = suspect.
http://lod.bco-dmo.org/id/dataset-parameter/33085.rdf
Name: cruise_id
Units: dimensionless
Description: Official cruise identifier e.g. KN199-04 = R/V Knorr cruise number 199-04.
http://lod.bco-dmo.org/id/dataset-parameter/33086.rdf
Name: station_GEOTRC
Units: dimensionless
Description: GEOTRACES station number; ranges from 1 through 12 for KN199-04 and 1 through 24 for KN204-01. Stations 7 and 9 were skipped on KN204-01. PI-supplied values were identical to those in the intermediate US GEOTRACES master file. Originally submitted as 'station'; this parameter name has been changed to conform to BCO-DMO's GEOTRACES naming conventions.
http://lod.bco-dmo.org/id/dataset-parameter/33087.rdf
Name: cast_GEOTRC
Units: dimensionless
Description: Cast identifier numbered consecutively within a station. Values were added from the intermediate US GEOTRACES master file (see Processing Description).
http://lod.bco-dmo.org/id/dataset-parameter/33088.rdf
Name: event_GEOTRC
Units: dimensionless
Description: Unique identifying number for US GEOTRACES sampling events; ranges from 2001 to 2225 for KN199-04 events and from 3001 to 3282 for KN204-01 events. Values were added from the intermediate US GEOTRACES master file (see Processing Description).
http://lod.bco-dmo.org/id/dataset-parameter/33089.rdf
Name: sample_GEOTRC
Units: dimensionless
Description: Unique identifying number for US GEOTRACES samples; ranges from 5033 to 6078 for KN199-04 and from 6112 to 8148 for KN204-01. PI-supplied values were identical to those in the intermediate US GEOTRACES master file Originally submitted as 'sample'; this parameter name has been changed to conform to BCO-DMO's GEOTRACES naming conventions.
Sample numbers from station 1 with 0 depth, were collected with WHOI's GEOTRACES pump and samples for stations > 1 from depth = 0, were collected with NASA's surface peristaltic pump. Samples with a GEOTRACES sample number also had pigment samples collected, missing sample numbers (nd) did not.
http://lod.bco-dmo.org/id/dataset-parameter/33090.rdf
Name: sample_bottle_GEOTRC
Units: dimensionless
Description: Unique identification numbers given to samples taken from bottles; ranges from 1 to 24; often used synonymously with bottle number. Values were added from the intermediate US GEOTRACES master file (see Processing Description).
http://lod.bco-dmo.org/id/dataset-parameter/33091.rdf
Name: bottle_GEOTRC
Units: dimensionless
Description: Alphanumeric characters identifying bottle type (e.g. NIS representing Niskin and GF representing GOFLO) and position on a CTD rosette. Values were added from the intermediate US GEOTRACES master file (see Processing Description).
http://lod.bco-dmo.org/id/dataset-parameter/33092.rdf
Name: depth_GEOTRC_CTD
Units: meters
Description: Observation/sample depth in meters; calculated from CTD pressure. Values were added from the intermediate US GEOTRACES master file (see Processing Description).
http://lod.bco-dmo.org/id/dataset-parameter/33093.rdf
Name: BTL_ISO_DateTime_UTC
Units: unitless
Description: Date and time (UTC) variable recorded at the bottle sampling time in ISO compliant format. Values were added from the intermediate US GEOTRACES master file (see Processing Description). This standard is based on ISO 8601:2004(E) and takes on the following form: 2009-08-30T14:05:00[.xx]Z (UTC time)
format: YYYY-MM-DDTHH:MM:SS[.xx][+/-TZ]
GB/NERC/BODC > British Oceanographic Data Centre, Natural Environment Research Council, United Kingdom
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
https://www.bco-dmo.org/dataset/3855/data/download
download
onLine
dataset
<p><strong>Methods for the Collection and Measurement of Dissolved Organic Carbon (DOC):</strong> Seawater samples for analysis of dissolved organic carbon (DOC) and chromophoric dissolved organic matter (CDOM) absorption are filtered under a gentle vacuum (&lt;5 in Hg) through pre-combusted (6 hours at 450°C) Whatman GF/F glass fiber filters and collected directly into pre-cleaned and pre-combusted sample glass bottles and vials. Duplicate samples at the surface and single samples at depth are collected for DOC analysis and stored frozen at -20°C. Samples are measured by high temperature combustion oxidation (HTCO) on a Shimadzu TOC-L carbon analyzer. Mean of replicate runs for individual samples must maintain a standard deviation &lt;2% for a minimum of 3 of 7 injections (Benner and Strom 1993; Sharp et al. 2002; Mannino et al. 2008). Accuracy of analyses is monitored by running DOC consensus reference material standards (CRM; Hansell Laboratory, University of Miami RSMAS); CRM measurements must maintain an analytical error to within ±5% of the consensus values.</p>
<p>Standard curves of the manufacturer-recommended carbon standard, potassium hydrogen phthalate (KHP), ranging from ~500 to 4000 μg C L-1 and from ~500 to 2000 μg C L-1 are conducted daily. KHP check standards are interspersed between every 6 samples for each sample batch to verify the consistency of the standard curve throughout each sample batch analyzed. To minimize salt accumulation in the instrument flow path, Milli-Q water blanks are inserted between every 3 samples for each batch of samples. Injection volumes for seawater samples, standards and blanks are typically 120μL.</p>
Specified by the Principal Investigator(s)
<p>Data are averages of samples replicates, the number of which is indicated as a data column. Standard deviation of replicates is included as a data column as well. Data has been visually QA/QC. Accuracy of analyses is monitored by running DOC consensus reference material standards (CRM; Hansell Laboratory, University of Miami RSMAS); CRM measurements must maintain an analytical error to within ±5% of the consensus values. Results of that comparison and all QA/QC metrics plots are contained in the accompanying Supplemental Document, "Matlab calibration report" (kn199-4_DOC_RUN.pdf).</p>
<p>Quality flags 'DOC_qf' are defined as: 1 = good; 2 = medium; 3 = suspect.</p>
<p><strong>BCO-DMO Processing Notes:</strong><br />
Edits made:<br />
- Parameter header names were renamed to BCO-DMO convention<br />
- Blank data fields and data reported as -999 were edited to 'nd'<br />
- Edited precision of lat/lon to four decimals.<br />
- Edited precision of DOC and DOC_sd to one decimal.<br />
- Removed the comment information from the file header. Where necessary the information was incorporated into BCO-DMO metadata fields and retained entirely in Dataset Description.<br />
<br />
<strong>Note</strong>: Correspondence with the PI (2013.01.12) regarding sample numbers indicates that samples with a GEOTRACES sample number also had pigment samples taken for the WHOI Thorium group. Those samples with -999 did not have corresponding pigment samples taken. Sample numbers of -999 were subsequently edited to 'nd' and the following comment was retained in the file header as per the PI:<br />
<br />
# samples from station 1 with 0 depth were collected with WHOI's GEOTRACES pump<br />
# sample numbers for stations &gt; 1 with depth = 0 were collected with NASA's<br />
# surface peristaltic pump</p>
<p><strong>Additional GEOTRACES Processing:</strong> After the data were submitted to the International Data Management Office, BODC, the office noticed that important identifying information was missing in many datasets. With the agreement of BODC and the US GEOTRACES lead PIs, BCO-DMO added standard US GEOTRACES information, such as the US GEOTRACES event number, to each submitted dataset lacking this information. To accomplish this, BCO-DMO compiled a 'master' dataset composed of the following parameters: station_GEOTRC, cast_GEOTRC (bottle and pump data only), event_GEOTRC, sample_GEOTRC, sample_bottle_GEOTRC (bottle data only), bottle_GEOTRC (bottle data only), depth_GEOTRC_CTD (bottle data only), depth_GEOTRC_CTD_rounded (bottle data only), BTL_ISO_DateTime_UTC (bottle data only), and GeoFish_id (GeoFish data only). This added information will facilitate subsequent analysis and inter comparison of the datasets.</p>
<p>Bottle parameters in the master file were taken from the GT-C_Bottle_GT10, GT-C_Bottle_GT11, ODF_Bottle_GT10, and ODF_Bottle_GT11 datasets. Non-bottle parameters, including those from GeoFish tows, Aerosol sampling, and McLane Pumps, were taken from the Event_Log_GT10 and Event_Log_GT11 datasets. McLane pump cast numbers missing in event logs were taken from the Particulate Th-234 dataset submitted by Ken Buesseler.</p>
<p>A standardized BCO-DMO method (called “join”) was then used to merge the missing parameters to each US GEOTRACES dataset, most often by matching on sample_GEOTRC or on some unique combination of other parameters.<br />
<br />
If the master parameters were included in the original data file and the values did not differ from the master file, the original data columns were retained and the name of the parameters were changed from the PI-submitted names to the standardized master names. If there were differences between the PI-supplied parameter values and those in the master file, both columns were retained. If the original data submission included all of the master parameters, no additional columns were added, but parameter names were modified to match the naming conventions of the master file.</p>
<p>See the dataset parameters documentation for a description of which parameters were supplied by the PI and which were added via the join method.</p>
Specified by the Principal Investigator(s)
asNeeded
7.x-1.1
Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Unavailable
508-289-2009
WHOI MS#36
Woods Hole
MA
02543
USA
info@bco-dmo.org
http://www.bco-dmo.org
Monday - Friday 8:00am - 5:00pm
For questions regarding this resource, please contact BCO-DMO via the email address provided.
pointOfContact
Niskin bottle
Niskin bottle
PI Supplied Instrument Name: Niskin bottle Instrument Name: Niskin bottle Instrument Short Name:Niskin bottle Instrument Description: A Niskin bottle (a next generation water sampler based on the Nansen bottle) is a cylindrical, non-metallic water collection device with stoppers at both ends. The bottles can be attached individually on a hydrowire or deployed in 12, 24 or 36 bottle Rosette systems mounted on a frame and combined with a CTD. Niskin bottles are used to collect discrete water samples for a range of measurements including pigments, nutrients, plankton, etc. Community Standard Description: http://vocab.nerc.ac.uk/collection/L22/current/TOOL0412/
Pump surface
Pump surface
PI Supplied Instrument Name: Pump surface PI Supplied Instrument Description:NASA's surface peristaltic pump was used to collect surface samples from station 1. WHOI's GEOTRACES pump was used to collect surface samples from all other stations. Instrument Name: Pump surface Instrument Short Name:Pump surface Instrument Description: A source of uncontaminated near-surface seawater pumped onto the deck of the research vessel that can be sampled and analyzed. This pumped seawater supply is from an over-the-side pumping system, and is therefore different from the vessel underway seawater system. Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/31/
Total Organic Carbon Analyzer
Total Organic Carbon Analyzer
PI Supplied Instrument Name: Total Organic Carbon Analyzer PI Supplied Instrument Description:Samples were measured by high temperature combustion oxidation (HTCO) on a Shimadzu
TOC-L carbon analyzer. Instrument Name: Total Organic Carbon Analyzer Instrument Short Name:TOC analyzer Instrument Description: A unit that accurately determines the carbon concentrations of organic compounds typically by detecting and measuring its combustion product (CO2). See description document at: http://bcodata.whoi.edu/LaurentianGreatLakes_Chemistry/bs116.pdf Community Standard Description: http://vocab.nerc.ac.uk/collection/L05/current/LAB04/
Cruise: KN199-04
KN199-04
R/V Knorr
Community Standard Description
International Council for the Exploration of the Sea
R/V Knorr
vessel
KN199-04
William J. Jenkins
Woods Hole Oceanographic Institution
http://bcodata.whoi.edu/US_GEOTRACES/AtlanticSection/Cruise_Report_for_Knorr_199_Final_v3.pdf
Report describing KN199-04
R/V Knorr
Community Standard Description
International Council for the Exploration of the Sea
R/V Knorr
vessel