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<title>WHOAS at MBLWHOI Library</title>
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<pubDate xmlns="http://apache.org/cocoon/i18n/2.1">Thu, 09 Feb 2012 15:39:21 GMT</pubDate>
<dc:date>2012-02-09T15:39:21Z</dc:date>
<item>
<title>Evolutionary origins of the estrogen signaling system : insights from amphioxus</title>
<link>http://hdl.handle.net/1912/5026</link>
<description>Evolutionary origins of the estrogen signaling system : insights from amphioxus
Callard, Gloria V.; Tarrant, Ann M.; Novillo, A.; Yacci, P.; Ciaccia, L.; Vajda, S.; Chuang, G.-Y.; Kozakov, D.; Greytak, S. R.; Sawyer, S.; Hoover, Cindi A.; Cotter, K. A.
Classically, the estrogen signaling system has two core components: cytochrome P450&#13;
aromatase (CYP19), the enzyme complex that catalyzes the rate limiting step in estrogen&#13;
biosynthesis; and estrogen receptors (ERs), ligand activated transcription factors that interact&#13;
with the regulatory region of target genes to mediate the biological effects of estrogen. While the&#13;
importance of estrogens for regulation of reproduction, development and physiology has been&#13;
well-documented in gnathostome vertebrates, the evolutionary origins of estrogen as a hormone&#13;
are still unclear. As invertebrates within the phylum Chordata, cephalochordates (e.g. the&#13;
amphioxus of the genus Branchiostoma) are among the closest invertebrate relatives of the&#13;
vertebrates and can provide critical insight into the evolution of vertebrate-specific molecules&#13;
and pathways. To address this question, this paper briefly reviews relevant earlier studies that&#13;
help to illuminate the history of the aromatase and ER genes, with a particular emphasis on&#13;
insights from amphioxus and other invertebrates. We then present new analyses of amphioxus&#13;
aromatase and ER sequence and function, including an in silico model of the amphioxus&#13;
aromatase protein, and CYP19 gene analysis. CYP19 shares a conserved gene structure with&#13;
vertebrates (9 coding exons) and moderate sequence conservation (40% amino acid identity with&#13;
human CYP19). Modeling of the amphioxus aromatase substrate binding site and simulated&#13;
docking of androstenedione in comparison to the human aromatase shows that the substrate&#13;
binding site is conserved and predicts that androstenedione could be a substrate for amphioxus&#13;
CYP19. The amphioxus ER is structurally similar to vertebrate ERs, but differs in sequence and&#13;
key residues of the ligand binding domain. Consistent with results from other laboratories,&#13;
amphioxus ER did not bind radiolabeled estradiol, nor did it modulate gene expression on an estrogen-responsive element (ERE) in the presence 59 of estradiol, 4-hydroxytamoxifen,&#13;
diethylstilbestrol, bisphenol A or genistein. Interestingly, it has been shown that a related gene,&#13;
the amphioxus “steroid receptor” (SR), can be activated by estrogens and that amphioxus ER can&#13;
repress this activation. CYP19, ER and SR are all primarily expressed in gonadal tissue,&#13;
suggesting an ancient paracrine/autocrinesignaling role, but it is not yet known how their&#13;
expression is regulated and, if estrogen is actually synthesized in amphioxus, whether it has a&#13;
role in mediating any biological effects . Functional studies are clearly needed to link emerging&#13;
bioinformatics and in vitro molecular biology results with organismal physiology to develop an&#13;
understanding of the evolution of estrogen signaling.
Author Posting. © The Author(s), 2011.  This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution.  The definitive version was published in Journal of Steroid Biochemistry and Molecular Biology 127 (2011): 176–188, doi:10.1016/j.jsbmb.2011.03.022.
</description>
<pubDate>Wed, 06 Apr 2011 00:00:00 GMT</pubDate>
<guid isPermaLink="false">http://hdl.handle.net/1912/5026</guid>
<dc:date>2011-04-06T00:00:00Z</dc:date>
</item>
<item>
<title>Source components of the Gran Canaria (Canary Islands) shield stage magmas : evidence from olivine composition and Sr–Nd–Pb isotopes</title>
<link>http://hdl.handle.net/1912/5025</link>
<description>Source components of the Gran Canaria (Canary Islands) shield stage magmas : evidence from olivine composition and Sr–Nd–Pb isotopes
Gurenko, Andrey A.; Hoernle, Kaj A.; Sobolev, Alexander V.; Hauff, Folkmar; Schmincke, Hans-Ulrich
The Canary Island primitive basaltic magmas 31 are thought to be derived from a&#13;
HIMU-type upwelling mantle containing isotopically depleted (NMORB) component and&#13;
having interacted with an enriched (EM)-type component whose origin is still a subject of&#13;
debate. We have studied the relationships between Ni, Mn and Ca concentrations in olivine&#13;
phenocrysts (85.6-90.0 mol.% Fo, 1722-3915 ppm Ni, 1085-1552 ppm Mn, 1222-3002 ppm&#13;
Ca) from the most primitive subaerial and ODP Leg 157 high-silica (picritic to olivine&#13;
basaltic) lavas with their bulk rock Sr-Nd-Pb isotope compositions (87Sr/86Sr = 0.70315-&#13;
0.70331, 143Nd/144Nd = 0.51288-0.51292, 206Pb/204Pb = 19.55-19.93, 207Pb/204Pb = 15.60-&#13;
15.63, 208Pb/204Pb = 39.31-39.69). Our data point toward the presence of both a peridotitic and&#13;
a pyroxenitic component in the magma source. Using the model [Sobolev et al. (2007) The&#13;
amount of recycled crust in sources of mantle-derived melts. Science 316: 412-417] in which&#13;
the reaction of Si-rich melts originated during partial melting of eclogite (a high pressure&#13;
product of subducted oceanic crust) with ambient peridotitic mantle forms olivine-free&#13;
reaction pyroxenite, we obtain an endmember composition for peridotite with 87Sr/86Sr =&#13;
0.70337, 143Nd/144Nd = 0.51291, 206Pb/204Pb = 19.36, 207Pb/204Pb = 15.61, 208Pb/204Pb = 39.07&#13;
(EM-type endmember) and pyroxenite with 87Sr/86Sr = 0.70309, 143Nd/144Nd = 0.51289,&#13;
206Pb/204Pb = 20.03, 207Pb/204Pb = 15.62, 208Pb/204Pb = 39.84 (HIMU-type endmember).&#13;
Mixing of melts from these endmembers in proportions ranging from 70% peridotite and 30%&#13;
pyroxenite to 28% peridotite and 72% pyroxenite can generate the compositions of the most primitive Gran Canaria shield stage lavas. Combining our results with those from the low&#13;
silica rocks from the western Canary Islands [Gurenko et al. (2009) Enriched, HIMU-type&#13;
peridotite and depleted recycled pyroxenite in the Canary plume: a mixed-up mantle. EPSL&#13;
277: 514-524], at least four distinct components are required. We propose that they are (1)&#13;
HIMU-type pyroxenitic component (representing recycled ocean crust of intermediate age)&#13;
from the plume center, (2) HIMU-type peridotitic component (ancient recycled ocean crust&#13;
stirred into the ambient mantle) from the plume margin, (3) depleted, MORB-type pyroxenitic component (young recycled oceanic crust) in the upper mantle entrained by the plume, and (4)&#13;
EM-type peridotitic component from the asthenosphere or lithosphere above the plume center.
Author Posting. © The Author(s), 2009.  This is the author's version of the work. It is posted here by permission of Springer for personal use, not for redistribution.  The definitive version was published in Contributions to Mineralogy and Petrology 159 (2010): 689-702, doi:10.1007/s00410-009-0448-8.
</description>
<pubDate>Tue, 01 Sep 2009 00:00:00 GMT</pubDate>
<guid isPermaLink="false">http://hdl.handle.net/1912/5025</guid>
<dc:date>2009-09-01T00:00:00Z</dc:date>
</item>
<item>
<title>Oxygen isotope heterogeneity of the mantle beneath the Canary Islands: insights from olivine phenocrysts</title>
<link>http://hdl.handle.net/1912/5024</link>
<description>Oxygen isotope heterogeneity of the mantle beneath the Canary Islands: insights from olivine phenocrysts
Gurenko, Andrey A.; Bindeman, Ilya N.; Chaussidon, Marc
A relatively narrow range of oxygen isotopic ratios (δ18O = 5.05.4‰) is preserved in olivine of mantle xenoliths, mid-ocean ridge (MORB) and most ocean island basalts (OIB). The values in excess of this range are generally attributed either to the presence of a recycled component in the Earth’s mantle or to shallow level contamination processes. A viable way forward to trace source heterogeneity is to find a link between chemical (elemental and isotopic) composition of the earlier crystallized mineral phases (olivine) and the composition of their parental magmas, then using them to reconstruct the composition of source region. The Canary hotspot is one of a few that contains ~1-2 Ga old recycled ocean crust that can be traced to the core-mantle boundary using seismic tomography and whose origin is attributed to the mixing of at least three main isotopically distinct mantle components i.e., HIMU, DMM and EM. This work reports ion microprobe and single crystal laser fluorination oxygen isotope data of 148 olivine grains also analyzed for major and minor elements in the same spot. The olivines are from 20 samples resembling the most primitive shield stage picrite through alkali basalt to basanite series erupted on Gran Canaria, Tenerife, La Gomera, La Palma and El Hierro, Canary Islands, for which shallow level contamination processes were not recognized. A broad range of δ18Oolivine values from 4.6 to 6.1‰ was obtained and explained by stable, long-term oxygen isotope heterogeneity of crystal cumulates present under different volcanoes. These cumulates are thought to have crystallized from mantle derived magmas uncontaminated at crustal depth, representing oxygen isotope heterogeneity of source region. A relationship between Ni×FeO/MgO and δ18Oolivine values found in one basanitic lava erupted on El Hierro, the westernmost island of the Canary Archipelago, was used to estimate oxygen isotope compositions of partial melts presumably originated from peridotite (HIMU-type component inherited its radiogenic isotope composition from ancient, ~12 Ga, recycled ocean crust) and pyroxenite (young, &lt;1 Ga, recycled oceanic crust preserved as eclogite with depleted MORB-type isotopic signature) components of the Canary plume. The model calculations yield 5.2 and 5.9±0.3‰ for peridotite and pyroxenite derived melts, respectively, which appeared to correspond closely to the worldwide HIMU-type OIB and upper limit N-MORB δ18O values. This difference together with the broad range of δ18O variations found in the Canarian olivines cannot be explained by thermodynamic effects of oxygen isotopic fractionation and are believed to represent true variations in the mantle, due to oceanic crust and continental lithosphere recycling.
Author Posting. © The Author(s), 2010.  This is the author's version of the work. It is posted here by permission of Springer for personal use, not for redistribution.  The definitive version was published in Contributions to Mineralogy and Petrology 162 (2011): 349-363, doi:10.1007/s00410-010-0600-5.
</description>
<pubDate>Tue, 16 Nov 2010 00:00:00 GMT</pubDate>
<guid isPermaLink="false">http://hdl.handle.net/1912/5024</guid>
<dc:date>2010-11-16T00:00:00Z</dc:date>
</item>
<item>
<title>Cross-shelf and out-of-bay transport driven by an open-ocean current</title>
<link>http://hdl.handle.net/1912/5023</link>
<description>Cross-shelf and out-of-bay transport driven by an open-ocean current
Zhang, Yu; Pedlosky, Jospeh; Flierl, Glenn R.
This paper studies the interaction of an Antarctic Circumpolar Current (ACC)–like wind-driven channel flow with a continental slope and a flat-bottomed bay-shaped shelf near the channel’s southern boundary. Interaction between the model ACC and the topography in the second layer induces local changes of the potential vorticity (PV) flux, which further causes the formation of a first-layer PV front near the base of the topography. Located between the ACC and the first-layer slope, the newly formed PV front is constantly perturbed by the ACC and in turn forces the first-layer slope with its own variability in an intermittent but persistent way. The volume transport of the slope water across the first-layer slope edge is mostly directly driven by eddies and meanders of the new front, and its magnitude is similar to the maximum Ekman transport in the channel. Near the bay’s opening, the effect of the topographic waves, excited by offshore variability, dominates the cross-isobath exchange and induces a mean clockwise shelf circulation. The waves’ propagation is only toward the west and tends to be blocked by the bay’s western boundary in the narrow-shelf region. The ensuing wave–coast interaction amplifies the wave amplitude and the cross-shelf transport. Because the interaction only occurs near the western boundary, the shelf water in the west of the bay is more readily carried offshore than that in the east and the mean shelf circulation is also intensified along the bay’s western boundary.
Author Posting. © American Meteorological Society, 2011.  This article is posted here by permission of American Meteorological Society for personal use, not for redistribution.  The definitive version was published in Journal of Physical Oceanography 41 (2011): 2168–2186, doi:10.1175/JPO-D-11-08.1.
</description>
<pubDate>Tue, 01 Nov 2011 00:00:00 GMT</pubDate>
<guid isPermaLink="false">http://hdl.handle.net/1912/5023</guid>
<dc:date>2011-11-01T00:00:00Z</dc:date>
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