The genomic standards consortium : bringing standards to life for microbial ecology
Gilbert, Jack A.
Amaral-Zettler, Linda A.
Cochrane, Guy R.
Glockner, Frank Oliver
MetadataShow full item record
Interest in sampling of diverse environments, combined with advances in high-throughput sequencing, vastly accelerates the pace at which new genomes and metagenomes are generated. For example, as of January 2011, 12 500 user-generated metagenomes have been submitted to the public MG-RAST Annotation server (http://metagenomics. nmpdr.org; Meyer et al., 2008), 490% of which were produced using high-throughput sequencing methodologies. We have entered into an era of ‘mega-sequencing projects’ that include the Genomic Encyclopaedia of Bacteria and Archaea project (http://www.jgi.doe.gov/programs/GEBA), the Microbial Earth Project (http://genome.jgi-psf. org/programs/bacteria-archaea/MEP/index.jsf), the Human Microbiome Project (http://nihroadmap.nih. gov/hmp), the Metagenomics of the Human Intestinal Tract consortium (http://www.metahit.eu), the Terragenome Initiative (http://www.terragenome. org), the Tara Oceans Expedition (http://oceans. taraexpeditions.org), the National Ecological Observatory Network (NEON-http://www.neoninc.org), the International Census of Marine Microbes (ICoMM-http://icomm.mbl.edu), Microbial Inventory Research Across Diverse Aquatic Long-Term Ecological Research Sites (http://amarallab.mbl. edu/mirada/mirada.html), the Earth Microbiome Project (http://www.earthmicrobiome.org) and other funded and unfunded projects, with many more visionary projects on the horizon.
© International Society for Microbial Ecology, 2011. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in The ISME Journal 5 (2011): 1565–1567, doi:10.1038/ismej.2011.39.
The following license files are associated with this item:
Except where otherwise noted, this item's license is described as Attribution-NonCommercial-ShareAlike 3.0 Unported
Showing items related by title, author, creator and subject.
Preparation of Mn-fiber standards for the efficiency calibration of the delayed coincidence counting system (RaDeCC) Scholten, Jan C.; Pham, Mai Khanh; Blinova, Oxana; Charette, Matthew A.; Dulaiova, Henrieta; Eriksson, Mats (2010-04)Precise measurements of the short lived radium isotopes 223Ra and 224Ra by means of the delayed coincidence counting system (RaDeCC) rely on an efficiency calibration of this system using Mn-fiber standards for which ...
Mysid crustaceans as standard models for the screening and testing of endocrine-disrupting chemicals Verslycke, Tim A.; Ghekiere, An; Raimondo, Sandy; Janssen, Colin R. (2006)Investigative efforts into the potential endocrine-disrupting effects of chemicals have mainly concentrated on vertebrates, with significantly less attention paid to understanding potential endocrine disruption in the ...