Escherichia coli K-12 : a cooperatively developed annotation snapshot—2005
Arnaud, Martha B.
Berlyn, Mary K. B.
Blattner, Frederick R.
Chaudhuri, Roy R.
Glasner, Jeremy D.
Keseler, Ingrid M.
Perna, Nicole T.
Rudd, Kenneth E.
Serres, Margrethe H.
Thomas, Gavin H.
Thomson, Nicholas R.
Wanner, Barry L.
MetadataShow full item record
The goal of this group project has been to coordinate and bring up-to-date information on all genes of Escherichia coli K-12. Annotation of the genome of an organism entails identification of genes, the boundaries of genes in terms of precise start and end sites, and description of the gene products. Known and predicted functions were assigned to each gene product on the basis of experimental evidence or sequence analysis. Since both kinds of evidence are constantly expanding, no annotation is complete at any moment in time. This is a snapshot analysis based on the most recent genome sequences of two E.coli K-12 bacteria. An accurate and up-to-date description of E.coli K-12 genes is of particular importance to the scientific community because experimentally determined properties of its gene products provide fundamental information for annotation of innumerable genes of other organisms. Availability of the complete genome sequence of two K-12 strains allows comparison of their genotypes and mutant status of alleles.
© The Author 2006. This article is posted here by permission of Oxford University Press. The definitive version was published in Nucleic Acids Research 34 (2006): 1-9, doi:10.1093/nar/gkj405.
Showing items related by title, author, creator and subject.
Li, Wenjing; Moriwaki, Takashi; Tani, Tomomi; Watanabe, Takashi; Kaibuchi, Kozo; Goshima, Gohta (Rockefeller University Press, 2012-11-26)Dynamic microtubules (MTs) are essential for various intracellular events, such as mitosis. In Drosophila melanogaster S2 cells, three MT tip-localizing proteins, Msps/XMAP215, EB1, and Sentin (an EB1 cargo protein), have ...
Itoh, Motoyo; Pickart, Robert S.; Kikuchi, Takashi; Fukamachi, Yasushi; Ohshima, Kay I.; Simizu, Daisuke; Arrigo, Kevin R.; Vagle, Svein; He, Jianfeng; Ashjian, Carin J.; Mathis, Jeremy T.; Nishino, Shigeto; Nobre, Carolina (Elsevier, 2015-04-25)Over the past few decades, sea ice retreat during summer has been enhanced in the Pacific sector of the Arctic basin, likely due in part to increasing summertime heat flux of Pacific-origin water from the Bering Strait. ...
Rabe, Benjamin; Karcher, Michael; Schauer, Ursula; Toole, John M.; Krishfield, Richard A.; Pisarev, Sergey; Kauker, Frank; Gerdes, Rudiger; Kikuchi, Takashi (2010-12-10)Unprecedented summer-season sampling of the Arctic Ocean during the period 2006−2008 makes possible a quasi-synoptic estimate of liquid freshwater (LFW) inventories in the Arctic Ocean basins. In comparison to observations ...