# Enriched GO categories by interval, in R readable format. # Interval = the time interval being examined # Rank = Rank in the GOseq test. # GO = Gene Ontology ID # Domain = Gene Ontology Domain # BP = Biological Process # CC = Cellular Compartment # MF = Molecular Function # Description = GO description # p-adjusted = GO-seq adjusted p-value # annotated = Total number of transcripts in the reference with this GO term # sign_decr = sign decreasing, indicating the number of transcripts with this GO term that had decreasing expression within the interval # sign_incr = sign decreasing, indicating the number of transcripts with this GO term that had increasing expression within the interval # ##-------------------------------------------------------------------------------------------- # "Interval" "Rank" "GO" "Domain" "Description" "p-adjusted" "annotated" "sign_decr" "sign_incr" "2h_7h" "1" "GO:0000278" "BP" "mitotic cell cycle" "0.000174593" "561" "17" "23" "2h_7h" "2" "GO:0005634" "CC" "nucleus" "0.000379238" "3666" "55" "72" "2h_7h" "3" "GO:0007049" "BP" "cell cycle" "0.000500694" "996" "25" "29" "2h_7h" "4" "GO:0022403" "BP" "cell cycle phase" "0.00072599" "599" "18" "21" "2h_7h" "5" "GO:0031323" "BP" "regulation of cellular metabolic process" "0.000904103" "2685" "41" "55" "2h_7h" "6" "GO:0022402" "BP" "cell cycle process" "0.002163322" "771" "22" "22" "2h_7h" "7" "GO:0080090" "BP" "regulation of primary metabolic process" "0.002528241" "2603" "39" "53" "2h_7h" "8" "GO:0000279" "BP" "M phase" "0.006225268" "366" "15" "11" "2h_7h" "9" "GO:0019222" "BP" "regulation of metabolic process" "0.006664456" "3004" "45" "56" "2h_7h" "10" "GO:0044260" "BP" "cellular macromolecule metabolic process" "0.006664456" "5437" "60" "94" "2h_7h" "11" "GO:0044428" "CC" "nuclear part" "0.006867935" "2461" "40" "50" "2h_7h" "12" "GO:0048583" "BP" "regulation of response to stimulus" "0.006972416" "1122" "21" "28" "2h_7h" "13" "GO:0000087" "BP" "M phase of mitotic cell cycle" "0.01153708" "222" "12" "7" "2h_7h" "14" "GO:0045995" "BP" "regulation of embryonic development" "0.01392983" "61" "5" "3" "2h_7h" "15" "GO:0016043" "BP" "cellular component organization" "0.01392983" "2818" "51" "45" "2h_7h" "16" "GO:0071842" "BP" "cellular component organization at cellular level" "0.01392983" "2348" "45" "39" "2h_7h" "17" "GO:0043228" "CC" "non-membrane-bounded organelle" "0.01392983" "2890" "49" "52" "2h_7h" "18" "GO:0043232" "CC" "intracellular non-membrane-bounded organelle" "0.01392983" "2890" "49" "52" "2h_7h" "19" "GO:0044424" "CC" "intracellular part" "0.01938643" "8400" "100" "134" "2h_7h" "20" "GO:0065009" "BP" "regulation of molecular function" "0.02180956" "1171" "23" "27" "2h_7h" "21" "GO:0006996" "BP" "organelle organization" "0.02180956" "1568" "32" "30" "2h_7h" "22" "GO:0043170" "BP" "macromolecule metabolic process" "0.02311689" "6307" "67" "98" "2h_7h" "23" "GO:0071840" "BP" "cellular component organization or biogenesis" "0.0239364" "3055" "51" "49" "2h_7h" "24" "GO:0044238" "BP" "primary metabolic process" "0.0239364" "8134" "89" "117" "2h_7h" "25" "GO:0071841" "BP" "cellular component organization or biogenesis at cellular level" "0.02493196" "2579" "46" "42" "2h_7h" "26" "GO:0035062" "CC" "omega speckle" "0.02597561" "4" "3" "0" "2h_7h" "27" "GO:0005515" "MF" "protein binding" "0.0274843" "4766" "66" "80" "2h_7h" "28" "GO:0044237" "BP" "cellular metabolic process" "0.03279829" "7765" "82" "120" "2h_7h" "29" "GO:0032268" "BP" "regulation of cellular protein metabolic process" "0.03576138" "759" "12" "25" "2h_7h" "30" "GO:0060255" "BP" "regulation of macromolecule metabolic process" "0.03610993" "2436" "34" "46" "2h_7h" "31" "GO:0005681" "CC" "spliceosomal complex" "0.03738638" "143" "8" "5" "2h_7h" "32" "GO:0006396" "BP" "RNA processing" "0.03807489" "590" "16" "15" "2h_7h" "33" "GO:0008152" "BP" "metabolic process" "0.03807489" "9633" "100" "134" "2h_7h" "34" "GO:0009954" "BP" "proximal/distal pattern formation" "0.03807489" "12" "4" "0" "2h_7h" "35" "GO:0016070" "BP" "RNA metabolic process" "0.03973094" "2434" "35" "44" "2h_7h" "36" "GO:0009966" "BP" "regulation of signal transduction" "0.03973094" "900" "18" "21" "2h_7h" "37" "GO:0048585" "BP" "negative regulation of response to stimulus" "0.03973094" "319" "8" "11" "2h_7h" "38" "GO:0043229" "CC" "intracellular organelle" "0.03973094" "7137" "84" "118" "2h_7h" "39" "GO:0048519" "BP" "negative regulation of biological process" "0.03973094" "1786" "34" "29" "2h_7h" "40" "GO:0043412" "BP" "macromolecule modification" "0.03973094" "2205" "29" "49" "2h_7h" "41" "GO:0043226" "CC" "organelle" "0.03973094" "7144" "84" "118" "2h_7h" "42" "GO:0005488" "MF" "binding" "0.04060868" "11065" "117" "143" "2h_7h" "43" "GO:0051246" "BP" "regulation of protein metabolic process" "0.04060868" "816" "12" "26" "2h_7h" "44" "GO:0044092" "BP" "negative regulation of molecular function" "0.04416862" "355" "8" "12" "2h_7h" "45" "GO:0000280" "BP" "nuclear division" "0.04416862" "205" "11" "5" "2h_7h" "46" "GO:0007067" "BP" "mitosis" "0.04416862" "205" "11" "5" "2h_7h" "47" "GO:0009953" "BP" "dorsal/ventral pattern formation" "0.04416862" "106" "7" "2" "2h_7h" "48" "GO:0010389" "BP" "regulation of G2/M transition of mitotic cell cycle" "0.04416862" "32" "3" "3" "2h_7h" "49" "GO:0050790" "BP" "regulation of catalytic activity" "0.04416862" "958" "18" "24" "7h_12h" "1" "GO:0022626" "CC" "cytosolic ribosome" "1.41E-46" "66" "0" "55" "7h_12h" "2" "GO:0003735" "MF" "structural constituent of ribosome" "1.74E-37" "175" "0" "77" "7h_12h" "3" "GO:0044391" "CC" "ribosomal subunit" "2.09E-33" "105" "0" "59" "7h_12h" "4" "GO:0005840" "CC" "ribosome" "3.49E-28" "321" "2" "93" "7h_12h" "5" "GO:0042254" "BP" "ribosome biogenesis" "1.44E-27" "281" "1" "88" "7h_12h" "6" "GO:0022627" "CC" "cytosolic small ribosomal subunit" "1.44E-27" "32" "0" "30" "7h_12h" "7" "GO:0006415" "BP" "translational termination" "1.25E-25" "54" "0" "36" "7h_12h" "8" "GO:0006414" "BP" "translational elongation" "9.01E-25" "73" "1" "43" "7h_12h" "9" "GO:0006614" "BP" "SRP-dependent cotranslational protein targeting to membrane" "1.64E-24" "54" "0" "37" "7h_12h" "10" "GO:0022613" "BP" "ribonucleoprotein complex biogenesis" "7.31E-24" "351" "2" "93" "7h_12h" "11" "GO:0071843" "BP" "cellular component biogenesis at cellular level" "1.18E-23" "378" "3" "95" "7h_12h" "12" "GO:0006613" "BP" "cotranslational protein targeting to membrane" "1.46E-23" "56" "0" "37" "7h_12h" "13" "GO:0045047" "BP" "protein targeting to ER" "1.46E-23" "56" "0" "37" "7h_12h" "14" "GO:0072599" "BP" "establishment of protein localization to endoplasmic reticulum" "1.46E-23" "56" "0" "37" "7h_12h" "15" "GO:0015935" "CC" "small ribosomal subunit" "2.84E-23" "48" "0" "33" "7h_12h" "16" "GO:0070972" "BP" "protein localization to endoplasmic reticulum" "1.33E-21" "60" "0" "37" "7h_12h" "17" "GO:0044445" "CC" "cytosolic part" "1.83E-21" "138" "0" "55" "7h_12h" "18" "GO:0022625" "CC" "cytosolic large ribosomal subunit" "1.00E-19" "35" "0" "26" "7h_12h" "19" "GO:0005198" "MF" "structural molecule activity" "3.53E-19" "357" "0" "86" "7h_12h" "20" "GO:0043624" "BP" "cellular protein complex disassembly" "9.64E-19" "90" "1" "40" "7h_12h" "21" "GO:0006612" "BP" "protein targeting to membrane" "1.22E-18" "82" "0" "40" "7h_12h" "22" "GO:0043241" "BP" "protein complex disassembly" "1.75E-18" "91" "1" "40" "7h_12h" "23" "GO:0000184" "BP" "nuclear-transcribed mRNA catabolic process- nonsense-mediated decay" "3.23E-18" "74" "0" "36" "7h_12h" "24" "GO:0019080" "BP" "viral genome expression" "1.22E-16" "92" "1" "39" "7h_12h" "25" "GO:0019083" "BP" "viral transcription" "1.22E-16" "92" "1" "39" "7h_12h" "26" "GO:0034623" "BP" "cellular macromolecular complex disassembly" "2.93E-16" "104" "1" "41" "7h_12h" "27" "GO:0032984" "BP" "macromolecular complex disassembly" "4.86E-16" "105" "1" "41" "7h_12h" "28" "GO:0019058" "BP" "viral infectious cycle" "9.26E-14" "125" "2" "42" "7h_12h" "29" "GO:0030529" "CC" "ribonucleoprotein complex" "3.46E-13" "631" "7" "108" "7h_12h" "30" "GO:0006413" "BP" "translational initiation" "3.63E-13" "140" "1" "42" "7h_12h" "31" "GO:0006412" "BP" "translation" "6.57E-13" "678" "7" "108" "7h_12h" "32" "GO:0072594" "BP" "establishment of protein localization to organelle" "7.43E-13" "118" "1" "40" "7h_12h" "33" "GO:0015934" "CC" "large ribosomal subunit" "2.79E-12" "57" "0" "27" "7h_12h" "34" "GO:0071845" "BP" "cellular component disassembly at cellular level" "6.04E-11" "147" "1" "42" "7h_12h" "35" "GO:0022415" "BP" "viral reproductive process" "7.04E-11" "150" "2" "42" "7h_12h" "36" "GO:0022411" "BP" "cellular component disassembly" "7.92E-11" "148" "1" "42" "7h_12h" "37" "GO:0000956" "BP" "nuclear-transcribed mRNA catabolic process" "3.01E-10" "127" "0" "39" "7h_12h" "38" "GO:0006402" "BP" "mRNA catabolic process" "5.22E-10" "134" "1" "39" "7h_12h" "39" "GO:0034645" "BP" "cellular macromolecule biosynthetic process" "1.86E-09" "2743" "69" "221" "7h_12h" "40" "GO:0006401" "BP" "RNA catabolic process" "4.95E-09" "148" "1" "40" "7h_12h" "41" "GO:0009059" "BP" "macromolecule biosynthetic process" "1.02E-07" "2879" "69" "225" "7h_12h" "42" "GO:0044085" "BP" "cellular component biogenesis" "1.35E-07" "1415" "34" "134" "7h_12h" "43" "GO:0034621" "BP" "cellular macromolecular complex subunit organization" "2.65E-07" "594" "13" "65" "7h_12h" "44" "GO:0048610" "BP" "cellular process involved in reproduction" "4.45E-07" "394" "9" "57" "7h_12h" "45" "GO:0006605" "BP" "protein targeting" "9.78E-07" "268" "7" "48" "7h_12h" "46" "GO:0042274" "BP" "ribosomal small subunit biogenesis" "2.04E-06" "19" "0" "12" "7h_12h" "47" "GO:0033365" "BP" "protein localization to organelle" "3.13E-06" "264" "8" "45" "7h_12h" "48" "GO:0003676" "MF" "nucleic acid binding" "1.05E-05" "2765" "65" "187" "7h_12h" "49" "GO:0019843" "MF" "rRNA binding" "1.36E-05" "28" "0" "13" "7h_12h" "50" "GO:0032774" "BP" "RNA biosynthetic process" "2.14E-05" "1812" "51" "139" "7h_12h" "51" "GO:0071841" "BP" "cellular component organization or biogenesis at cellular level" "2.33E-05" "2579" "88" "184" "7h_12h" "52" "GO:0016032" "BP" "viral reproduction" "3.85E-05" "238" "3" "44" "7h_12h" "53" "GO:0010467" "BP" "gene expression" "6.19E-05" "3064" "69" "233" "7h_12h" "54" "GO:0043565" "MF" "sequence-specific DNA binding" "0.000238418" "464" "8" "44" "7h_12h" "55" "GO:0001071" "MF" "nucleic acid binding transcription factor activity" "0.000305059" "587" "8" "56" "7h_12h" "56" "GO:0003700" "MF" "sequence-specific DNA binding transcription factor activity" "0.000305059" "587" "8" "56" "7h_12h" "57" "GO:0000786" "CC" "nucleosome" "0.000330144" "188" "2" "13" "7h_12h" "58" "GO:0000028" "BP" "ribosomal small subunit assembly" "0.002365089" "5" "0" "5" "7h_12h" "59" "GO:0035282" "BP" "segmentation" "0.00262819" "98" "2" "18" "7h_12h" "60" "GO:0006334" "BP" "nucleosome assembly" "0.003018609" "199" "2" "14" "7h_12h" "61" "GO:0003677" "MF" "DNA binding" "0.003018609" "1429" "40" "86" "7h_12h" "62" "GO:0030900" "BP" "forebrain development" "0.003211941" "239" "14" "20" "7h_12h" "63" "GO:0043933" "BP" "macromolecular complex subunit organization" "0.004533724" "847" "20" "71" "7h_12h" "64" "GO:0044260" "BP" "cellular macromolecule metabolic process" "0.004533724" "5437" "153" "320" "7h_12h" "65" "GO:0007420" "BP" "brain development" "0.005584573" "411" "17" "34" "7h_12h" "66" "GO:0000003" "BP" "reproduction" "0.00576258" "799" "18" "76" "7h_12h" "67" "GO:0006886" "BP" "intracellular protein transport" "0.00859785" "414" "9" "54" "7h_12h" "68" "GO:0044249" "BP" "cellular biosynthetic process" "0.009108019" "3497" "80" "235" "7h_12h" "69" "GO:0009952" "BP" "anterior/posterior pattern specification" "0.01044507" "174" "3" "24" "7h_12h" "70" "GO:0031497" "BP" "chromatin assembly" "0.0111975" "206" "2" "14" "7h_12h" "71" "GO:0022414" "BP" "reproductive process" "0.0122178" "775" "18" "73" "7h_12h" "72" "GO:0009798" "BP" "axis specification" "0.01298371" "80" "2" "15" "7h_12h" "73" "GO:0000976" "MF" "transcription regulatory region sequence-specific DNA binding" "0.01326523" "103" "1" "14" "7h_12h" "74" "GO:0071840" "BP" "cellular component organization or biogenesis" "0.01411005" "3055" "98" "196" "7h_12h" "75" "GO:0007417" "BP" "central nervous system development" "0.01411005" "536" "19" "41" "7h_12h" "76" "GO:0065004" "BP" "protein-DNA complex assembly" "0.01433233" "221" "3" "15" "7h_12h" "77" "GO:0031326" "BP" "regulation of cellular biosynthetic process" "0.01433233" "1804" "49" "125" "7h_12h" "78" "GO:2000112" "BP" "regulation of cellular macromolecule biosynthetic process" "0.01499864" "1710" "45" "121" "7h_12h" "79" "GO:0003002" "BP" "regionalization" "0.01595373" "312" "7" "32" "7h_12h" "80" "GO:0090304" "BP" "nucleic acid metabolic process" "0.01673328" "3334" "83" "206" "7h_12h" "81" "GO:0009889" "BP" "regulation of biosynthetic process" "0.01748868" "1820" "49" "126" "7h_12h" "82" "GO:0030490" "BP" "maturation of SSU-rRNA" "0.01797816" "11" "0" "6" "7h_12h" "83" "GO:0032993" "CC" "protein-DNA complex" "0.02131139" "212" "2" "14" "7h_12h" "84" "GO:0034728" "BP" "nucleosome organization" "0.0220173" "213" "2" "15" "7h_12h" "85" "GO:0009790" "BP" "embryo development" "0.02245148" "898" "26" "65" "7h_12h" "86" "GO:0010556" "BP" "regulation of macromolecule biosynthetic process" "0.02300119" "1727" "45" "121" "7h_12h" "87" "GO:0019219" "BP" "regulation of nucleobase-containing compound metabolic process" "0.02475823" "2017" "79" "116" "7h_12h" "88" "GO:0071824" "BP" "protein-DNA complex subunit organization" "0.02475823" "230" "3" "16" "7h_12h" "89" "GO:0005667" "CC" "transcription factor complex" "0.02501985" "860" "19" "67" "7h_12h" "90" "GO:0032991" "CC" "macromolecular complex" "0.02912815" "3848" "93" "257" "7h_12h" "91" "GO:0044267" "BP" "cellular protein metabolic process" "0.02945583" "2804" "89" "189" "7h_12h" "92" "GO:0042255" "BP" "ribosome assembly" "0.03049497" "11" "0" "6" "7h_12h" "93" "GO:0045743" "BP" "positive regulation of fibroblast growth factor receptor signaling pathway" "0.03884615" "10" "1" "4" "7h_12h" "94" "GO:0071822" "BP" "protein complex subunit organization" "0.04167732" "530" "17" "51" "7h_12h" "95" "GO:0021536" "BP" "diencephalon development" "0.04167732" "71" "2" "10" "7h_12h" "96" "GO:0031323" "BP" "regulation of cellular metabolic process" "0.04167732" "2685" "104" "151" "7h_12h" "97" "GO:0009948" "BP" "anterior/posterior axis specification" "0.04241085" "41" "1" "10" "7h_12h" "98" "GO:0006323" "BP" "DNA packaging" "0.0430544" "234" "4" "15" "7h_12h" "99" "GO:0009058" "BP" "biosynthetic process" "0.0430544" "3715" "82" "242" "7h_12h" "100" "GO:0015031" "BP" "protein transport" "0.04395802" "613" "19" "61" "7h_12h" "101" "GO:0000578" "BP" "embryonic axis specification" "0.04395802" "32" "1" "9" "7h_12h" "102" "GO:0009880" "BP" "embryonic pattern specification" "0.04485141" "82" "3" "11" "7h_12h" "103" "GO:0006364" "BP" "rRNA processing" 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